Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g605 ATGAGAACCAGGCAAGGGAAGCGATCTGAGGCCTTTTGGCCTTCCATTGTGATGAAGAAATGGCTAAATATTAAGCCCAAGGCCTATGATTTCAGTGAAGATGAGGTTGACACTGAGACAGAGAGTGAGGATGATGCTTGCTCTCTTAAGGATGCAAGAGTACAGATGGGTGAGGACCATGCCTGTAGAATGCAGAGGAACCAATCCGTATGCACGAATCAAACTTCAGAGTCGAAGGGCTATTCATCAAGTCACAGAAGAGGAAAATCAGAAACTCTGCGTGTTCACTACATAAACAGAAAGGATATCAGGTTGACAATTGGCACTTGGAATGTTGCTGGAAGGCTTCCAAATGAGGATCTTGAGATTGAGGAGTGGCTCTGTATGCAAGAACCTGCAGATATTTACATTCTCGGTTTCCAAGAGGTGGTTCCTTTGAATGCTGGGAACGTACTTGGAGCAGAGGACAGTCAACCAATTCCAAAATGGGAGGCAATCATTCGTAGAACCTTGAATAAATCTTTTGAACCAGAATCCGAGTACAAAAGCTATAGTGCTCCAACCTCTCCTGTACTGAGGGCATCTTGTGTTGCTGATGCACTTAAAGAAGAGGTTGACAGTCCTACATTAGAGATGATGAACAATGAGACTGCAGCTCCCACTAACGGTTGTAACTTAGAAAGACACAAACTAAATGGTATGATTGGCACAGGGAAGAAATTCCAGCTAAGGAGATTATATGGTGGTGACAGCGACATTAGATTAGACTGGCCTGAATATTCATTAGATAAAGTCCCTCAAGTTCTCTCTAATTTGAAATTGCGGAGAGTATTGAGCAGCTCAGCAAGAGTTGGCTTTGGTTGGATGGAGACTCCTATAAATTTTAGTCCTCAAAAGGTCACATTGGATGGTGGGGGGATGAAAAGGTCATACCGTAGCTCTGGAAACCTAGGATTGATCTTCATGGAGCAGCAAGAGAGGTCTAAACTTTGTGATTATCTCTCTGATGTTTCTGACAGGTCTTCTGAAGAGGAAGATGAATCTCTTATTGAAATACCTGAACATCAATTCAAAGATGGAGAAAATAAAGATTGCATGAAGTCACGTCAGAGCTATGTGCGAATAGTTAGCAAGCAGATGGTAGGGATATACATATCAGTGTGGGTGCGAAAAAGGTTGAGGAGACATATAAACAACTTGAAAGTTTCTCCTGTTGGAGTCGGCCTTATGGGCTACATGGGAAACAAGGGATCAGTTTCTGTTAGCATGTCAGTTTTCCAAACTCGGATATGCTTTGTTTGCTCTCATCTGACTTCTGGTCACAAGGACGGTGATAAGCAGAGGCGTAATTCTGATGTTTATGAGATCTTAAGGCGTACCCAATTCTCATCTGTCATTGATGCTGATCAGCCAGAGACAATTCCTAGTCATGACCAGATATTCTGGTTTGGGGATTTAAACTACCGTCTCAATATGTTGGACGCAGAGATAAGGAAGCTTGTTGCTAGGAAAAAGTGGGATGAACTTATCAACAGTGATCAGCTGAGCAAAGAGCTAAGGAGTGGCCATGTATTTGAGGGATGGAAGGAGGGGGTGATAGACTTCCCACCCACATACAAGTATGAAATCAACTCTGATAGATACGTCGGAGAAAACCCAAAAGAGGGAGAGAAGAAAAGATCTCCAGCATGGTGTGATAGAATACTATGGTTAGGGAAAGGCATAAAGCAGCTCTGTTACAATCGAGCAGAGATAAGAGTTTCAGATCATCGTCCTGTTAGTTCAAATTTCATGGTTGAGGTTGAAGTTTTTGACCATCGGAAGCTTCAGAGGGCTCTCAAACCCACCGATGCAAGAGTACACCCAGAGATTTTCCTTGATGAATAG 1887 42.93 MRTRQGKRSEAFWPSIVMKKWLNIKPKAYDFSEDEVDTETESEDDACSLKDARVQMGEDHACRMQRNQSVCTNQTSESKGYSSSHRRGKSETLRVHYINRKDIRLTIGTWNVAGRLPNEDLEIEEWLCMQEPADIYILGFQEVVPLNAGNVLGAEDSQPIPKWEAIIRRTLNKSFEPESEYKSYSAPTSPVLRASCVADALKEEVDSPTLEMMNNETAAPTNGCNLERHKLNGMIGTGKKFQLRRLYGGDSDIRLDWPEYSLDKVPQVLSNLKLRRVLSSSARVGFGWMETPINFSPQKVTLDGGGMKRSYRSSGNLGLIFMEQQERSKLCDYLSDVSDRSSEEEDESLIEIPEHQFKDGENKDCMKSRQSYVRIVSKQMVGIYISVWVRKRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSVFQTRICFVCSHLTSGHKDGDKQRRNSDVYEILRRTQFSSVIDADQPETIPSHDQIFWFGDLNYRLNMLDAEIRKLVARKKWDELINSDQLSKELRSGHVFEGWKEGVIDFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLCYNRAEIRVSDHRPVSSNFMVEVEVFDHRKLQRALKPTDARVHPEIFLDE* 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6406802 6414734 - Vvi2g605 Vvi2g605 783304

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g605 628 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 627 - -
Vvi2g605 628 SUPERFAMILY DNase I-like 95 186 IPR036691 -
Vvi2g605 628 SMART i5p_5 316 605 IPR000300 GO:0016791|GO:0046856
Vvi2g605 628 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 627 IPR045849 GO:0004445|GO:0046855
Vvi2g605 628 SUPERFAMILY DNase I-like 366 615 IPR036691 -
Vvi2g605 628 Gene3D Endonuclease/exonuclease/phosphatase 316 623 IPR036691 -
Vvi2g605 628 Gene3D Endonuclease/exonuclease/phosphatase 84 201 IPR036691 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g605 K24221 IP5P1_2; type I inositol polyphosphate 5-phosphatase IP5P1/2 [EC:3.1.3.56] - vvi:100267737 1248.03
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g605 . Blo03g00111 Bda06g01281 . . Bpe07g00226 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0619 Cone12ag0604 . . . . . . . . Bda07g00843 . . . . Bma12g00225 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004106 1 6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 6 3 1 43