Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g635 ATGATAAGACCATTGGGGGTCCAATCCATAACCTTTTTTTTTTCCCTCTTCTTTTATATTTTTCTCCCCCAGTTCCCTCGAAATAAACTAAACCGCAAAACCAACAGGGCGCTGGTTTTTTTAATTTTGTTTCGGGTTTTTTATATTTTCCCTAGTTTTCTGTTTTCTTTTGATGTGGGCATGGCTGGTTTGGATTTAGGCACTGCTTCTCGTTACATTCATCAGCTTCACCGTTCGGACTTGCACCTCCAGAGGCCACAGGACTCTGACGAAGACAACAACACCAACAGGGGTGGGGCTCAGTACTCCGGCGACCATCAGGACGATGTGGCGCACCATGGCCTCGAGCTCGTCAGCGCTAACGCCGGTCCCGGAGACATCGTGGCGCGGAGGCCCAGGGGTCGGCCACCTGGCTCCAAGAACAGGCCCAAGCCTCCGGTGATCATCACCAGAGAGAGTGCAAACACGCTTCGAGCTCATATTCTAGAGGTGGGTAATGGATGTGATGTGTTCGACTGTGTTGCCACCTATGCCCGCCGGCGGCAGCGGGGGATCTGTATACTTTCGTTATCTGGATCCTTCTTGCCGCCGCCTGCGCCGCCTGGTGCAACTAGTTTAACCATTTTCTTGGCCGGAGGGCAAGGCCAAGTCGTCGGGGGTAGCGTGGTGGGTGAGCTGACTGCGGCGGGGCCGGTTATTGTGATCGCAGCATCGTTTACTAATGTGGCCTATGAGCGATTGCCGTTGGATGAGGAGGAGCCACTCCAGATGCAGCAGCAGTCTTCTTGTTGTTCTTCATCGAACCTTCTCTTCTTTATAAGAAATGGTTTGAGGATATTCAGCTTAATTTACTCAACACTTCTCTACATTCAGAATCTGATAGGCTTTCATAAGTAG 897 51.06 MIRPLGVQSITFFFSLFFYIFLPQFPRNKLNRKTNRALVFLILFRVFYIFPSFLFSFDVGMAGLDLGTASRYIHQLHRSDLHLQRPQDSDEDNNTNRGGAQYSGDHQDDVAHHGLELVSANAGPGDIVARRPRGRPPGSKNRPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEEPLQMQQQSSCCSSSNLLFFIRNGLRIFSLIYSTLLYIQNLIGFHK* 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6784847 6786547 + Vvi2g635 Vvi2g635 783334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g635 298 MobiDBLite consensus disorder prediction 124 146 - -
Vvi2g635 298 Gene3D - 183 262 - -
Vvi2g635 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 187 241 IPR005175 -
Vvi2g635 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 61 189 - -
Vvi2g635 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 187 263 - -
Vvi2g635 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 187 263 IPR014476 GO:0003680
Vvi2g635 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 61 189 IPR014476 GO:0003680
Vvi2g635 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 154 255 - -
Vvi2g635 298 MobiDBLite consensus disorder prediction 83 105 - -
Vvi2g635 298 ProSiteProfiles PPC domain profile profile. 120 261 IPR005175 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g635 - - vvi:100262516 371.318