Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g646 ATGGATGAGACTCTTATATTGCTCAAATCTTTGTTGAATGGAACATATGCAGAAACTTTCAATGGTCTGAAGGATGTACAAAAGGGTGTAGAAATTGGCAAGATGTGGGAGAAATACATTCTTCAAGTGGCTGATGATATTTTCTTTTATGAACAAATCGAGAACTATAATAAGCCCTTTCTTGATGCCTTGAGCCAGTATGATGATGGGAAGGATCTTTCTGATTATGATTTTAACCATGATGGCTGTAGTTCTCCATATGATGATCTCAACAAAAGAAAACTAGCTTACAGGCATCGTGTTATAGCCCATAAATACAAACAGGGCTTGCATAACACTTTTGATCAGGATATGATAAAACTCTGGGATGATCTCTATGATATGACAGACAGTTATACAGATAAATGGCTCTCCTCAGCACGGGCCTTCTTGGAGCAGTGCTCAGACGAGAACAAAGATTCAACTCCTCTTGCTCCTGCCAATGGGGTTGTTGACTCTATTGATGCAAAATCCCAGAATGTTAATGTTTTAGTGACTTCTGGATCACTGATACCCAGTCTTGTTAAATGCTTACTCTTTCGACTGGACAATCTGATAACACATGGAAATGTTTACAGCTCATGGGAGGTGGGGAAGCTCCAATGTTTTTCATGGATCAAGGAGCGTTTCAGTGGTCCAAATGTCCGCTTTTGTGTAATTGGGGATGGATGGGAAGAGTGTGAGGCAGCACAGACTATGAGATGGCCATTTGTTAAGATTGATCTACGGCCAGGCAGTTCTCACAGATTTCCAGGCCTTACGTTGAGGACAGTAGGCCACTATTTCTCTATCGTGTATGGAATCCCAGATGCTGAAAATGATGATGAGTAG 870 41.03 MDETLILLKSLLNGTYAETFNGLKDVQKGVEIGKMWEKYILQVADDIFFYEQIENYNKPFLDALSQYDDGKDLSDYDFNHDGCSSPYDDLNKRKLAYRHRVIAHKYKQGLHNTFDQDMIKLWDDLYDMTDSYTDKWLSSARAFLEQCSDENKDSTPLAPANGVVDSIDAKSQNVNVLVTSGSLIPSLVKCLLFRLDNLITHGNVYSSWEVGKLQCFSWIKERFSGPNVRFCVIGDGWEECEAAQTMRWPFVKIDLRPGSSHRFPGLTLRTVGHYFSIVYGIPDAENDDE* 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6938298 6951193 - Vvi2g646 Vvi2g646 783345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g646 289 TIGRFAM EYA-cons_domain: EYA conserved domain 1 271 IPR006545 GO:0007275
Vvi2g646 289 Gene3D - 1 261 IPR038102 -
Vvi2g646 289 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 1 280 - -
Vvi2g646 289 PANTHER EYES ABSENT 1 280 IPR028472 GO:0004725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g646 - K17620 vvi:100247200 605.905