Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g653 ATGGGAAGCGGATTGTCGCAGCTATGCCCTTGCTTTGTGCCGGCCAGCAGGACGGCGGTCGAGGAGCCGGAGGTGGTCTTCACGGCCTCCGAGCCCCTAGATGAAACCCTAGGGCATTCTTTTTGTTATGTGCGCTCTTCCGCTAGGTTTTTGTCTCCGACGCAGTCCGATCGGTTTGCCATTTCGGGAGCTTCGGTGAGCGCTAACACGTCGACGCCGAGGACGGTTCTCCAGCTGGAGAATATTTACGATGATGCCACTGACTGCGTGGGCGGTGGCGTCAAGGGGAGTATAGTGAATGGCTTCGAGAGCACGGCGTCGTTTAGTGCTCTGCCGCTGCAGCCGGTGCCCAGGGGCGGTGAAGCTTCCGGTCCGATTGACCGCGGCTTCTTTATGTCCGGTCCGATCGAGCGAGGCGCTCTGTCCGGTCCCCTCGATGCCAACGCCGGCTCTGACGGCGGAAGAGTCCATTTCTCGGCTCCATTAAACGGACTTTATGTGAAAAAGAAGAGGAAGAAGGGTATTTCGGCAATTCGGAAGGCTTTTTACCGGAATTTTTCCGAGAAGAAGCGACCGTGGGTGGTGCCGGTGAAGAGTGAGAGCAATGTTCAGTGGGCTTTAGGGAAGGCGGGGGAGGATCGGGTGCATGTGGTTGTATCCGAAGAGCATGGGTGGTTGTTTGTTGGGATTTATGATGGGTTTAACGGCCCTGATGCTCCCGAATTCTTGATGGGTAATCTCTACCGTGCTGTATTTAATGAGCTAGAAGGTTTATTTTGGGATGTTGGAAATGAGGTGACATTTCAACCTGAACCACCAGAGATTAGACGAAGGCGTCTATGGGAATTTCTTGCTGAGGATGATCAGGAAGATGGGCTTGATCTTTCTGGTTCAGACCGATTTGCATTTTCCGTTGATGATGCACTTAGTGTAAACAATGCAGGGTCTGCAGTAAGTAGGCGATGGTTGTTGTTGTCAAAATTGAAGCATGGGTTATCAAAGCATAAGGAGGGCCATGGTCGAAAACTATTTCCATGGAGGTTTGGTTTAGAGGATAAAGAGAAAGTTGAAGTTGATAATAGAGTAGAGGAGACGTCAGGTTCCAGAGGTAGGAAAAGGAAAGTGGGTCCTGTTGATCATGAGTTGGTATTGAAGGCAATGTCTCGGGCCTTAGAATTGACTGAGCTTGCATATTTGGACATGACAGATAAGGTTCTTGATCAGAATCCAGAGCTTGCTCTGATGGGTTCTTGTTTACTGGTTGTGCTCATGAGAGATGAGGATGTGTATGTGATGAATGTTGGTGATAGCCGCGCTCTTGTTGCACAGTATGAAACGCAAGAAGGTAGTTCTAGTGTGGAGTCTAAGGGGGAGGGGAAGAATAGGTCAAACATAGATGATATAGTTGAAGTGTCCACAGATGGCTGTGAGAAAGAAAATAAGGTGGTAAATGAAGATTTTGTTAAAGGGATGCGGTTGACTGCATTGCAATTGTCCACTGATCACAGCACAAGCATTGAAGAAGAAGTCATAAGAATCAAGAATGAACACCCAGATGACAGCCAATGTATAGTCAACGATAGAGTGAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAATGGAATGATGTTCTATTAGAAATGTTTCGGAATGAGTATATTGGCACTGCACCTTACATATCATGTTCGCCTTCCCTTTGTTATCACCAACTCTGTCCGAGAGATCAGTTTCTGATCCTCTCATCTGATGGGTTATATCAGTATTTAAGCAATCAAGAAGTGGTTTGTGAGGTCGAGAAATTCATGGAGAAGTTTCCTGAAGGAGACCCTGCCCAGCATTTGATAGAGGAGCTTCTTTCCCGTGCTGCAAAGAAAGCTGGGTTGAATTTCCATGAATTGCTGGACATCCCACAAGGAGACCGCCGGAAGTACCATGATGATGTCACTGTCATGCTCCAGCTATCCGGCCTGCAATGCTCTGACTTCTTCATAGGACTCAGACTCATTGATCTTTTTAGCAAAGAGCTTGAGGTCTCTAATCTGAGGGTTGTAGGAGTAGTTATGGCGCTTGTGGCGTTGGAGGGAGAGCACAGAGGGTTTGGGCTTGGTGGGGTTGATCCAAGTGGACTTAGGCTTGGATACAAGATGGGTTTGGCCAGAATGGTCTCTGGTGAGGATGGTTTTGGAGAGGGGCTTGAGCTGTTCAGACAGAGAAGGGTTTTGGTGGTTGGTCTGCTCTGA 2265 48.39 MGSGLSQLCPCFVPASRTAVEEPEVVFTASEPLDETLGHSFCYVRSSARFLSPTQSDRFAISGASVSANTSTPRTVLQLENIYDDATDCVGGGVKGSIVNGFESTASFSALPLQPVPRGGEASGPIDRGFFMSGPIERGALSGPLDANAGSDGGRVHFSAPLNGLYVKKKRKKGISAIRKAFYRNFSEKKRPWVVPVKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELEGLFWDVGNEVTFQPEPPEIRRRRLWEFLAEDDQEDGLDLSGSDRFAFSVDDALSVNNAGSAVSRRWLLLSKLKHGLSKHKEGHGRKLFPWRFGLEDKEKVEVDNRVEETSGSRGRKRKVGPVDHELVLKAMSRALELTELAYLDMTDKVLDQNPELALMGSCLLVVLMRDEDVYVMNVGDSRALVAQYETQEGSSSVESKGEGKNRSNIDDIVEVSTDGCEKENKVVNEDFVKGMRLTALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVLLEMFRNEYIGTAPYISCSPSLCYHQLCPRDQFLILSSDGLYQYLSNQEVVCEVEKFMEKFPEGDPAQHLIEELLSRAAKKAGLNFHELLDIPQGDRRKYHDDVTVMLQLSGLQCSDFFIGLRLIDLFSKELEVSNLRVVGVVMALVALEGEHRGFGLGGVDPSGLRLGYKMGLARMVSGEDGFGEGLELFRQRRVLVVGLL* 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7060027 7078684 - Vvi2g653 Vvi2g653 783352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g653 754 Gene3D - 179 664 IPR036457 -
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 18 59 IPR015655 GO:0004722|GO:0006470
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 60 272 IPR015655 GO:0004722|GO:0006470
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 319 660 IPR015655 GO:0004722|GO:0006470
Vvi2g653 754 CDD PP2Cc 379 660 IPR001932 -
Vvi2g653 754 SMART PP2C_4 196 661 IPR001932 -
Vvi2g653 754 Pfam Protein phosphatase 2C 497 630 IPR001932 -
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 29 18 59 - -
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 29 60 272 - -
Vvi2g653 754 PANTHER PROTEIN PHOSPHATASE 2C 29 319 660 - -
Vvi2g653 754 SUPERFAMILY PP2C-like 199 660 IPR036457 -
Vvi2g653 754 ProSiteProfiles PPM-type phosphatase domain profile. 196 663 IPR001932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g653 - - vvi:100264235 1247.26