Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g66 ATGCTATTGCCATTGCCCGGAAACAATGGATTACATGTTTGTTTTCTGTTCAAGCAGGCCCAAATTAGGAATCAACACAAGCGTGTTCTTCTTTTAGCATACCAGAGTTTGGGGATTGTGTTTGGCAGCTTGAGTACTTCCCCGCTTTATGTGTATAAAATTACATTCTCTGGTTGGCTGCAACATTATCAAACTGAAGATGCAGTGTTTGGGGCATGTTCTTTGATCTTTTGGACTTTCATGCTCCTTCCATTGTTCAAGTATGTTGTCATCATGTTGAGTGTAGATGATAATGGTGAAGGAGGAACTTTCGCTTTATACTCGCTTCTCTGCAGACATGCAAAGCTTTGTTTGCTTCCTAATCATCAAGCAGCAGATGAGGACCTTTCTACGTATTTTAGTCCACGTTACTCGAATAGGAACATACCTCCCTCTGTATTCAAAAGATATGTTGAGAAACATAAAAACACAAGGACTGGCTTACTCCTTGTAGTTTTGTTTGGTGCTTCTATGGTGATAGCTATTGGTGTCATCACTCCTTCAATTACTGTTTTGTCATCCATTGAAGGGCTGAAAGTTCGAGTCAAGAATGCAGATGACAGAATGGTGGTTGCTATCACCTGCTTTGTATTGGTTTGTCTTATCGTCCGGCAGCACCATGGCACCCACAGGGTGGGCATCACATTTGCACCCATTGTGCTCCTGTGGTTGCTGTCTGTTGCCCTTCTCGGCATCTACAATATCACCAAGTGGAACCCAAGAATTTACCAGGCTCTTTCGCCCTACTACATTTACAAGTTCTTCAGGAACACGGGAAAAGATGGATGGATCTCCCTTGGAGGAATTTTTCTATGTATTACTGGAACTGAAGCTATGTTTGCAGACCTTGGCCAATTCACAGCTACATCCATGAGGGTTGCATTTTTTGTTGTCATTTACCCGTGTCTAATGCTTCAATACACGGGGCAGGCTGCATTTCTTTCAAAGAACTTTTCTGCAGTAGATATAAGCTTCTATGCTTCTGTACCAGAGCCCTTGTTCTGGCCAGTTTTTGTTCTTGCAATTTCAACTGGGATTGTTGCCAGTCAGGCGGCAATCTCCGAGACGTTCTCAATTGTTCAACAATGTCAGGCATTAGGATGTTTCCCTCGTGTCAAGATTGTACACACATCAAGATGGATCCATGGTAAGATCTACATTCCAGAGATAAACTGGATCCTTATGATACTCATTCTGACTGTCACACTTGGTTTTGGAGACACAACCCTCATGGGAAATGCCTATGGGATTGCGTATATGAGTGTGACATTGGTGACAACATTGTTGATGACACTGGCCATTACCCTGGTGTGGCATAAGACTCTCGTGCTTGCCCTGTCATTCCTACTGTTATTTGGATCAATGGAGATTATCTTCCTTTCATCTTCTTATATGAGAATCCATAGGGGTGGGTGGCTTCCAATCATGTTGTCTTCAGTCTTCCTTGCTGTTATGTATGTGTGGCACTATGGCAGCAGGCGGAAGTATTTATCTGATCAACAGAACAGGATACCCATGAAAAGGATTCTCTCACTTGGCCCCAGTCTTGGGATTATCAGGACTCCCGGTATAGGCGTCATCTACACTGAATTGGCAACTGGGGTACCAGCCACATTTTCCCATTTCCTCACCAACTTGCCATCCTTCTACCAGGTCATCGTCTTCGTCTGCATCAAGACCATTCACGTCCCTTACATCTCTCATAAGGAGCGCTACCTCATCGGCCGGATTGGACCCAAAGCTTATCAGATGTACAGATGCATTATCCGATATGGTTACAAAGATGTCCATAAGAGTAACGAAGATTTTGAGTACAACCTGGTGATGAGCATAGCGGAGTTCATTCAACTGGAATCAGAAGGCTCGAGAACCCCAGATGGGTCGGTGGATGGCAGACTGGCAGTCGTGAGGACCTCTGAGAAGACCGGAATGAGAATGGTAATGTCAGAATCTGCTAATCTGGGAGAAAGCTACGGCAGCGGAAGCAGCAGCTGGACCGGTTCCGCCGCTCTGAGCAGTAGCAAGTCGGCCACTCTGCGGAGACTCCAGGCCTTGTACGAGCAGGAAGTACCAGCCCATCTGAGCCGCAGGCGGCATGTGCGGTACCAGCTGCTGGACAAAAACTACAAGCACCCACACGTGAAAGAAGAGCTGCTGGAGCTTGTGGAAGCGAAGCATGCAGAAGTGGCATATGTGATAGGGCATTCCTATATAAAGGCGAGAAGAAACTCATCGTTCTTGAAGAAGTTGGCTGTGGATGTAGCCTACTCTTTCTTGCGTAGAAACTGCAGATCCCCAGGTGTGGCCCTGCACATTCCCCACATCAGCTTGATCATGGCAGGGATGAACTATTATGTCTAG 2400 45.75 MLLPLPGNNGLHVCFLFKQAQIRNQHKRVLLLAYQSLGIVFGSLSTSPLYVYKITFSGWLQHYQTEDAVFGACSLIFWTFMLLPLFKYVVIMLSVDDNGEGGTFALYSLLCRHAKLCLLPNHQAADEDLSTYFSPRYSNRNIPPSVFKRYVEKHKNTRTGLLLVVLFGASMVIAIGVITPSITVLSSIEGLKVRVKNADDRMVVAITCFVLVCLIVRQHHGTHRVGITFAPIVLLWLLSVALLGIYNITKWNPRIYQALSPYYIYKFFRNTGKDGWISLGGIFLCITGTEAMFADLGQFTATSMRVAFFVVIYPCLMLQYTGQAAFLSKNFSAVDISFYASVPEPLFWPVFVLAISTGIVASQAAISETFSIVQQCQALGCFPRVKIVHTSRWIHGKIYIPEINWILMILILTVTLGFGDTTLMGNAYGIAYMSVTLVTTLLMTLAITLVWHKTLVLALSFLLLFGSMEIIFLSSSYMRIHRGGWLPIMLSSVFLAVMYVWHYGSRRKYLSDQQNRIPMKRILSLGPSLGIIRTPGIGVIYTELATGVPATFSHFLTNLPSFYQVIVFVCIKTIHVPYISHKERYLIGRIGPKAYQMYRCIIRYGYKDVHKSNEDFEYNLVMSIAEFIQLESEGSRTPDGSVDGRLAVVRTSEKTGMRMVMSESANLGESYGSGSSSWTGSAALSSSKSATLRRLQALYEQEVPAHLSRRRHVRYQLLDKNYKHPHVKEELLELVEAKHAEVAYVIGHSYIKARRNSSFLKKLAVDVAYSFLRRNCRSPGVALHIPHISLIMAGMNYYV* 800
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 727513 734302 - Vvi2g66 Vvi2g66 782765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g66 799 Pfam K+ potassium transporter 34 608 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi2g66 799 TIGRFAM kup: potassium uptake protein 32 799 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi2g66 799 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 799 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi2g66 799 PANTHER POTASSIUM TRANSPORTER 3 22 799 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g66 K03549 - vvi:100260429 1490.71