Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g696 | ATGCTGCAGAGTTCAATCAGTACAATTCCTAATACAGAGGCTATAGGGATCTTGAATAACTTGTGTGGTGATCCCAAGAATGTTGTCTTCGTTGTTAGTGGGAAGGACAAGAAGACTCTTACTGAAGGGTTTTCTTCTTGTGAGAAGCTTGGGATTGCAGCTGAGCATGGTTATTTTTTGAGGCTAAGTCATGATGCAGAGTGGGAAACTTGCTTGCCTGTGACAGACTTTGATTGGAAACAGATTGCAGAGCCAGTTATGAAATTATACACTGAAACAACTGATGGTTCTACCATAGAGACCAAAGAAAGTGCACTTGTTTGGAATTATCAATATGCAGATCCGGATTTTGGCTCTTGCCAGGCTAAGGAGCTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGTCAACATATTGTAGAAGTTAAACCTCAGGGTGTCAACAAGGGTCTTGTAGCGGAACGTCTCCTTGTAACAATGCGGCAGAAGGGGATGCTTCCAGATTTTGTGCTATGTATTGGAGATGATCGATCGGATGAGGACATGTTTGAAGTGATAATAAGGGCAAAGGGGCTTCCTTCTCTCTCCCCAGTTGCTGAAGTGTTTGCTTGCACTGTTGGTAGGAAACCCAGCAAAGCTAAGTACTACTTAGAAGACACAACTGAGATATTGAGAATGTTACAGGGCCTTGTGACTGCATCCGAGCAGGCTGCTAGAAATGCTTCCCATGTAGCTTCCACGCGGGCGATTATCGACAGAGAGTAA | 786 | 44.15 | MLQSSISTIPNTEAIGILNNLCGDPKNVVFVVSGKDKKTLTEGFSSCEKLGIAAEHGYFLRLSHDAEWETCLPVTDFDWKQIAEPVMKLYTETTDGSTIETKESALVWNYQYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGLVAERLLVTMRQKGMLPDFVLCIGDDRSDEDMFEVIIRAKGLPSLSPVAEVFACTVGRKPSKAKYYLEDTTEILRMLQGLVTASEQAARNASHVASTRAIIDRE* | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8014612 | 8020562 | - | Vvi2g696 | Vvi2g696 | 783395 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g696 | 261 | SUPERFAMILY | HAD-like | 9 | 238 | IPR036412 | - | |
Vvi2g696 | 261 | Gene3D | - | 73 | 152 | - | - | |
Vvi2g696 | 261 | TIGRFAM | T6PP: trehalose-phosphatase | 9 | 238 | IPR003337 | GO:0003824|GO:0005992 | |
Vvi2g696 | 261 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 12 | 194 | IPR006379 | - | |
Vvi2g696 | 261 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 | 1 | 244 | - | - | |
Vvi2g696 | 261 | CDD | HAD_TPP | 9 | 227 | - | - | |
Vvi2g696 | 261 | Gene3D | - | 9 | 224 | IPR023214 | - | |
Vvi2g696 | 261 | Pfam | Trehalose-phosphatase | 4 | 227 | IPR003337 | GO:0003824|GO:0005992 | |
Vvi2g696 | 261 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 244 | IPR001830 | GO:0003824|GO:0005992 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g696 | K16055 | - | vvi:100259175 | 521.931 |