Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g696 ATGCTGCAGAGTTCAATCAGTACAATTCCTAATACAGAGGCTATAGGGATCTTGAATAACTTGTGTGGTGATCCCAAGAATGTTGTCTTCGTTGTTAGTGGGAAGGACAAGAAGACTCTTACTGAAGGGTTTTCTTCTTGTGAGAAGCTTGGGATTGCAGCTGAGCATGGTTATTTTTTGAGGCTAAGTCATGATGCAGAGTGGGAAACTTGCTTGCCTGTGACAGACTTTGATTGGAAACAGATTGCAGAGCCAGTTATGAAATTATACACTGAAACAACTGATGGTTCTACCATAGAGACCAAAGAAAGTGCACTTGTTTGGAATTATCAATATGCAGATCCGGATTTTGGCTCTTGCCAGGCTAAGGAGCTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGTCAACATATTGTAGAAGTTAAACCTCAGGGTGTCAACAAGGGTCTTGTAGCGGAACGTCTCCTTGTAACAATGCGGCAGAAGGGGATGCTTCCAGATTTTGTGCTATGTATTGGAGATGATCGATCGGATGAGGACATGTTTGAAGTGATAATAAGGGCAAAGGGGCTTCCTTCTCTCTCCCCAGTTGCTGAAGTGTTTGCTTGCACTGTTGGTAGGAAACCCAGCAAAGCTAAGTACTACTTAGAAGACACAACTGAGATATTGAGAATGTTACAGGGCCTTGTGACTGCATCCGAGCAGGCTGCTAGAAATGCTTCCCATGTAGCTTCCACGCGGGCGATTATCGACAGAGAGTAA 786 44.15 MLQSSISTIPNTEAIGILNNLCGDPKNVVFVVSGKDKKTLTEGFSSCEKLGIAAEHGYFLRLSHDAEWETCLPVTDFDWKQIAEPVMKLYTETTDGSTIETKESALVWNYQYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGLVAERLLVTMRQKGMLPDFVLCIGDDRSDEDMFEVIIRAKGLPSLSPVAEVFACTVGRKPSKAKYYLEDTTEILRMLQGLVTASEQAARNASHVASTRAIIDRE* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8014612 8020562 - Vvi2g696 Vvi2g696 783395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g696 261 SUPERFAMILY HAD-like 9 238 IPR036412 -
Vvi2g696 261 Gene3D - 73 152 - -
Vvi2g696 261 TIGRFAM T6PP: trehalose-phosphatase 9 238 IPR003337 GO:0003824|GO:0005992
Vvi2g696 261 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 12 194 IPR006379 -
Vvi2g696 261 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 244 - -
Vvi2g696 261 CDD HAD_TPP 9 227 - -
Vvi2g696 261 Gene3D - 9 224 IPR023214 -
Vvi2g696 261 Pfam Trehalose-phosphatase 4 227 IPR003337 GO:0003824|GO:0005992
Vvi2g696 261 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 244 IPR001830 GO:0003824|GO:0005992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g696 K16055 - vvi:100259175 521.931