Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g737 ATGGGCAGTAGTGAGATGGATAAGGCAGGGAAGGAGAAGGAGTCAAAGACACCGCCTACTACTACACAGGAGCAGTCTTCAACCACGAGCGCTGGAACAGTTAATCCTGATTGGTCTGGATTTCAGGCATATTCTCCCATACCTCCACATGGGTTCTTGGCGTCAAGTCCCCAAGCTCACCCTTACATGTGGGGAGTTCAGCATCTAATGCCTCCATATGGTACCCCACCACATCCATATGTTGCAATGTATCCCCCTGGTGGCTTATATGCTCATCCATCTATTCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCTATGCCTTCTCCAAATGGCATTGCTGAGACCTCTGGAACCACTCCGGGAAGCATGGAAGCTGATGGTAAATCATCTGAGGGTAAGGAAAAATTGCCCATCAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAATATGCTTACAGGCAAGAATAATGAACTTGGTAAAACATCAGGAGCATCTGCTAATGGAGTGTATTCTAAAAGTGCTGAGAGTGCTAGTGAAGGTTCAAGCGAAGGGAGTGATGCAAATTCTCAGAGTGACTCACAACTGAAGTCTGGATGTAGGCAAGATTCTTTGGAAGCTGAAACATCTCAGAATGGCAGCACTTGCCATGCTCCTCAAAATGGAGGACCAAATACACCTCATGCAATGGTGAACCAAACAATGGCCATCATGCCAATATCAGCACCTGGTGCTCCAGGAGGTGTTCCTGGTCCTACTACAAACTTAAACATTGGAATGGATTACTGGGGTGCTCCAACTTCATCTACTATTCCTGCAATGCGTGGGAAGGTTCCTTCTGCTCCAGTCACAGGAGGAATTGTTACTGCTGGGTCACGAGACAGTGTTCAATCACAGCTTTGGTTACAGGATGAAAGAGAGCTTAAAAGACAGAGAAGAAAGCAGTCGAACCGGGAGTCTGCTCGCCGATCCAGGTTGCGTAAGCAGGCGGAATGTGATGAGCTGGCCCAGCGTGCTGACGCTTTAAAAGAAGAGAATGCCTCTCTTAGAGCAGAAGTCAGTCGCATCAAGAGCGAGTATGAGCAGCTTCTGTCTGAGAATGCCTCTCTTAAGGAGAGACTTGGAGAAATTCCGGGGCAGGATGATCATAGAACTGGTGGGAGGAACGAGCAACACTTGGGTAATGACACTAAACAAACTGGACAAACTGGGCAAGCAGAGCATGGGCAGGGTGGTCACTAA 1242 47.75 MGSSEMDKAGKEKESKTPPTTTQEQSSTTSAGTVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQHLMPPYGTPPHPYVAMYPPGGLYAHPSIPPGSYPFSPFAMPSPNGIAETSGTTPGSMEADGKSSEGKEKLPIKRSKGSLGSLNMLTGKNNELGKTSGASANGVYSKSAESASEGSSEGSDANSQSDSQLKSGCRQDSLEAETSQNGSTCHAPQNGGPNTPHAMVNQTMAIMPISAPGAPGGVPGPTTNLNIGMDYWGAPTSSTIPAMRGKVPSAPVTGGIVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRAEVSRIKSEYEQLLSENASLKERLGEIPGQDDHRTGGRNEQHLGNDTKQTGQTGQAEHGQGGH* 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9137679 9153416 - Vvi2g737 Vvi2g737 783436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g737 413 Pfam Disordered region downstream of MFMR 135 272 - -
Vvi2g737 413 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Vvi2g737 413 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
Vvi2g737 413 MobiDBLite consensus disorder prediction 367 413 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 1 42 - -
Vvi2g737 413 Gene3D - 308 363 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 19 40 - -
Vvi2g737 413 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 404 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 1 18 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 307 331 - -
Vvi2g737 413 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 404 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vvi2g737 413 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
Vvi2g737 413 MobiDBLite consensus disorder prediction 392 413 - -
Vvi2g737 413 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Vvi2g737 413 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
Vvi2g737 413 MobiDBLite consensus disorder prediction 111 229 - -
Vvi2g737 413 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Vvi2g737 413 MobiDBLite consensus disorder prediction 146 229 - -
Vvi2g737 413 Coils Coil 325 373 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 375 391 - -
Vvi2g737 413 MobiDBLite consensus disorder prediction 111 126 - -
Vvi2g737 413 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14612 PF16596 MFMR_assoc 5.30E-62 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g737 K09060 - vvi:100243644 803.897