Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g74 ATGGCTACCAATTCTTCAGCTGGGCATGCATGTCCATCTCCGATGAAGTCGGTGTCTAATGGCATTTTTCAAGGGGATAATCCTCTTCATTTTGCGCTCCCTCTTGCCATTTTGCAGATTTGCCTGGTGCTTGTTGTTACACGAGGTCTTGCTTATCTTTTCAGACCGCTAAGGCAGCCACGAGTGATTGCAGAGATTGTGGGAGGAATACTACTTGGGCCATCAGCTCTGGGTCGAAGCGAGAGCTATCTGCACGCAGTATTCCCATCACAAAGCCTCACAGTGTTGGACACTCTAGCCAACCTTGGACTCCTGTTCTTTCTATTCCTTGCAGGCCTAGAGTTGGATCCTAAGTCTCTTCGTCGAACTGGAAAGAAAGCCCTTGGAATTGCCATCGCCGGAATCAGCCTCCCTTTTGCATTAGGAATTGGCACATCATTTGTTCTCCGAGAAACCATAGCCAAAGGGGTCAATGGGACCTCCTTTCTTGTATTCATGGGTGTCGCACTTTCCATAACTGCCTTCCCTGTCTTAGCCCGTATATTAGCTGAGCTGAAACTTTTAACTACTGATGTTGGCAGAATGGCAATGTCAGCTGCAGCCGTTAATGATGTGGCTGCATGGATTCTACTTGCTCTTGCTATTTCCTTATCTGGCAGTAAACAGTCTCCCATTGTGCCATTCTGGGTTCTCTTATGTGGGTGTGGCTTTGTTATTTGTGCGAGTCTCATTCTCCCACCAATATTCAAATGGATGGCCAGGCGATGCCATGAAGGTGAGCCAGTGGATGAGATGTATATATGTTCTACATTAGCTGTTGTTCTGGCAGCTGGGGTTGTTACTGATGCCATTGGGATCCATGCCATGTTTGGGGCTTTTGTGGTTGGAATTCTGGTCCCAAAGGAAGGGCCATTTGCAAGCGCTCTTCTGGAGAAAGTTGAAGATCTTGTATCTGGCCTCTTTCTGCCACTTTACTTTGTCTCCAGTGGATTGAAAACCAATGTAGCTACAATTCAAGGGCTTCAGTCATGGGCTCTCCTGGTCTTGGTCATATTTACAGCCTGCATTGGGAAAATTGTGGGCACTGTTGTGGTTTCCCTTTCATTCAAAATGCCTCTGCGTGAAGCTCTGGCACTGGGGTTCCTAATGAACAGTAAAGGCTTGGTGGAGCTCATTGTCCTCAACATTGGTAAAGATCGAAAGGTATTAAATGACCAGACATTTGCCATAATGGTTCTAATGGCTCTTTTTACAACATTTATCACCACACCTCTAGTCGTGGCTGTGTATAAGCCAGCTAAAAGGGAAAGAAACACTGACCACAAGCAAAGAACAGGTGTTCGATCAGAGTCCAACCAGATTGTTGTGGCTTTTGAGGCTTTCCAGCAGCTAAGCCAAGTGTCTGTCCGGCCAATGACTTCCATATCTTCAATATCTGACATGCACGAGGACATTTGTACCACTGCTGATAGGAAGAGGGTTGCTATAATCATTCTACCATTCCACAAGCACCAGAGGGTGGATGGCTCACTTGAGACTACACGAACAGACTTCCGTTGGGTTAACCGTAGGGTTCTTGAACATGCAGCCTGCTCAGTTGGGATCCTAGTAGACCGCGGGCTTGGTGGTACCACCCATGTATCAGCAAGTAATGTTTCTTATTTCATCACAGTACTCTTCTTTGGTGGCCATGATGACCGTGAAGCTCTTGCTTATGGGATTCGCATGGCTGAGCATCCTGGTATCAATTTAATGGTCATTCGCTTCTTAGTTGAGCATGAGACTGCAGAGGGGATTGAGTTAGTTGATGGAAATTCCAAACCTGATGAGGAGTATAGGAGAAGCGAGTGTCCAGAATTGGGGCCTTTGGGGAGTTTGTTGGCTTCAACAGATTTCTCAACAGCGGCATCAGTTTTGGTGATCCAACAGTACCATGGTAGTGTATCTCCAAATTTGGCCTTAGACCTGGAGGAAGGATTGCCTGATTCCGAATCTAACTGA 2001 46.58 MATNSSAGHACPSPMKSVSNGIFQGDNPLHFALPLAILQICLVLVVTRGLAYLFRPLRQPRVIAEIVGGILLGPSALGRSESYLHAVFPSQSLTVLDTLANLGLLFFLFLAGLELDPKSLRRTGKKALGIAIAGISLPFALGIGTSFVLRETIAKGVNGTSFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAISLSGSKQSPIVPFWVLLCGCGFVICASLILPPIFKWMARRCHEGEPVDEMYICSTLAVVLAAGVVTDAIGIHAMFGAFVVGILVPKEGPFASALLEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWALLVLVIFTACIGKIVGTVVVSLSFKMPLREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVVAVYKPAKRERNTDHKQRTGVRSESNQIVVAFEAFQQLSQVSVRPMTSISSISDMHEDICTTADRKRVAIIILPFHKHQRVDGSLETTRTDFRWVNRRVLEHAACSVGILVDRGLGGTTHVSASNVSYFITVLFFGGHDDREALAYGIRMAEHPGINLMVIRFLVEHETAEGIELVDGNSKPDEEYRRSECPELGPLGSLLASTDFSTAASVLVIQQYHGSVSPNLALDLEEGLPDSESN* 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 798756 804686 - Vvi2g74 Vvi2g74 782773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g74 666 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi2g74 666 Gene3D - 35 441 IPR038770 -
Vvi2g74 666 PANTHER CATION/H(+) ANTIPORTER 18 7 451 - -
Vvi2g74 666 PANTHER CATION/H + ANTIPORTER 447 609 - -
Vvi2g74 666 PANTHER CATION/H + ANTIPORTER 7 451 - -
Vvi2g74 666 PANTHER CATION/H + ANTIPORTER 614 657 - -
Vvi2g74 666 PANTHER CATION/H(+) ANTIPORTER 18 447 609 - -
Vvi2g74 666 PANTHER CATION/H(+) ANTIPORTER 18 614 657 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g74 - - vvi:100263862 814.683