Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g741 ATGGACTTGATGAGCTATTTGCTATGTCTTCTTGTCGCCTGGACCTCAATTTACATCGTTGTCTCAGCTAGAAGAAGCAAATCTGGTGCTGGCAAGCTTCCGCCTGGACCTGTCCCATTTCCGATCATTGGAAACCTTTTAAACCTTGGAAACAAACCCCATGAATCCCTGGCTAACCTTGCCAAAATTTATGGCCCCGTGATGAGTCTCAAGCTTGGCTGTGTAACCACAGTAGTCATCACATCTGCAACCATGGCCAAAGAAGTCCTCCAAAAGAAGGACCAGTCCTTCTGCAACCGAACCATTCCTGATGCCCTCCGAGCCCTTAACCACAACCAGATCTCCATGGTGTGGCTACCCGTTTCCACAAAGTGGAGAACCCTTCGGAAGATATGCAATTCACACATATTCACGAATCAAAAACTAGACTCCAGCAACTACCTCCGCCACCAGAAAGTGCAAGACCTTCTAGCCAATGTTGAACAAAGCTGCCAGGCTGGTGATGTAGTAGATATTGGCCAAGAAGCTTTCAGAACTACTCTTAACTTGTTATCAAACACCACTTTTTCTGTGGATCTGGTAGAACCAAGTTCTGATACTGTGCAGGAGTTTAAGGAGTTAGTACGGCATATGATGGAAGAAGCTGCGAAACCCAATTTGGCAGATTATTTTCCGGTTGTTAGGAAGATCGATCCACAGGGTATAAGGCGTCGTATGGCAATTCATTTTGGAAAGATGATTAAGGTGTTGGATAAAAAGGTCAAGCAACGTCTGCGGTCAAGACAAGTGCAGGGTTGGATGGCTAGCAGCGATGTGTTAGATACTCTTCTCAACATCAGTGAAGACAGCAATAATTTTCTTGATATAACTCATATTGACCACTTGTTACTGGACCTATTTGTTGCGGGGACTGATACAACTGCGAACACATTGGAATGGGCAATGGCAGAACTATTGCACAACCCGGAAACACTGTTGAGAGTTCAAGCAGAGCTCCGTCAAACCATAGGTAAAGACAAACTGGTAAAAGAATCAGACATCGCCCGACTTCCATACTTGCAAGCAGTGGTGAAAGAAACCTTCCGATTGCATCCAGCGGTTCCATTCTTACTCCCACGCAAAGTCGAAGTAGACACAGAAATGTGTGGGTTCATTGTCCCAAAGGATGCACAAGTACTTGTAAATGTGTGGGCTATAGGCCGAGATCCCAATCTGTGGGAGAACCCCAACTTGTTTATGCCAGAGAGGTTCTTGGGATCGGATATGGATGTGAGGGGCCAGAACTTTGAGCTAATCCCATTCGGTGCCGGTAGGCGAATCTGTCCGGGGTTGCTACTAGGTATCCGGATGGTTCAATTGATGTTGGCTTCACTCATTCACTCCAATGACTGGAAGCTTGAAGATGGGCTGACACCAGAGAATATGAACATGGAAGAAAAGTTTGGCTTCACCTTACAGAAGGCTCAGCCCCTGCGTGTTCTCCCTATCCATAGGCTGCCAAACCCAATAATGGCAATTCATTTTGGAAACATGATTGAGGTGTTCGATAAAATGGTCAAGCAACGTCTGCGGTCAAGACAAGTGCAGGGTTGGATGGCTAGCAGCGATGTGTTGCATATTCTTCTCACCATCAGTGAAGACAGCAATAATGTTCTTGATATAACTAATATTGACCACTTGTTACTGGACCTATTTGCGGCGGGGACTGATACAACTACGAACACATTGGAATGGGCAATGGCAAACTACTACACAAACCCGAAACACTACGGAGAGTCCAAGTAG 1785 45.83 MDLMSYLLCLLVAWTSIYIVVSARRSKSGAGKLPPGPVPFPIIGNLLNLGNKPHESLANLAKIYGPVMSLKLGCVTTVVITSATMAKEVLQKKDQSFCNRTIPDALRALNHNQISMVWLPVSTKWRTLRKICNSHIFTNQKLDSSNYLRHQKVQDLLANVEQSCQAGDVVDIGQEAFRTTLNLLSNTTFSVDLVEPSSDTVQEFKELVRHMMEEAAKPNLADYFPVVRKIDPQGIRRRMAIHFGKMIKVLDKKVKQRLRSRQVQGWMASSDVLDTLLNISEDSNNFLDITHIDHLLLDLFVAGTDTTANTLEWAMAELLHNPETLLRVQAELRQTIGKDKLVKESDIARLPYLQAVVKETFRLHPAVPFLLPRKVEVDTEMCGFIVPKDAQVLVNVWAIGRDPNLWENPNLFMPERFLGSDMDVRGQNFELIPFGAGRRICPGLLLGIRMVQLMLASLIHSNDWKLEDGLTPENMNMEEKFGFTLQKAQPLRVLPIHRLPNPIMAIHFGNMIEVFDKMVKQRLRSRQVQGWMASSDVLHILLTISEDSNNVLDITNIDHLLLDLFAAGTDTTTNTLEWAMANYYTNPKHYGESK* 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9295260 9321129 + Vvi2g741 Vvi2g741 783440

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g741 594 Gene3D Cytochrome P450 495 592 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 SUPERFAMILY Cytochrome P450 504 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 497 - -
Vvi2g741 594 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 504 589 - -
Vvi2g741 594 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vvi2g741 594 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 Gene3D Cytochrome P450 18 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 497 - -
Vvi2g741 594 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 504 589 - -
Vvi2g741 594 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g741 594 Pfam Cytochrome P450 492 589 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g741 - - K23810 vvi:100254114 981.474
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g741 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000276 0 5 1 0 1 4 0 5 5 7 5 5 3 10 7 9 5 5 4 5 6 6 4 5 7 13 5 4 4 6 146