Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g765 ATGGTGGAGACAGAGAGGGAGAGGGAGAAGGTAAGATCACAAACCAATTTTGCTGGAATTGCAGTTTCAATCTCGCTCCTCGTTCTTCTCCTCGGCCTTTCCTTCAGCTCCAAACCCTTCCCATCTTCTCCATTGAGGTTATTTACTGCTCAAGAGCTGGCTCTACATAATGGAGCCAATGATTCCTTGCCCATCCTTTTGGCAATTCTCGGGTCTGTTTTTGATGTAACCAAAGGAAAATCTCATTACGGCTTGGGAGGCGGCTACAATCATTTTTCTGGAAGGGATGCTTCGCGTGCATTTGTTTCAGGAAATTTTTCAGGAGATGGACTTACTGACTCATTGCGTGGTTTATCGAGCACTGAGGTGAAGAGTGTTGTTGAATGGCGGGATTTCTACTTCAGAAGCTATATATTTGTTGGTAAGCTAGTGGGTCTTTACTACGATAGTCATGGTAATCCCACAAAACAATTGAAAGGAGTTGAAGCCAAGGCTGCTAGGGGTGCACAGCTTTTGGAGAAGCAAAAGAGTGAAGAAGCAAAGCTACCTAGTTGCAATTCAAGATGGAGTCAGGATGAAGGTGGAAAGGTTTGGTGTGACAATGGCTATCCAAGACTAATTCAAAGGCCTCTAGAAATTGCTTTGACCGGGAAAATGAGCAAGCGATGTGCTTGCTTTAAAGAAGATCAACTGGGCCAGCAAGGGTTGGAAGTCTACCAAGGATGTGATTATCATGCCAAGGTTTGCCAAGTTTAA 756 44.44 MVETEREREKVRSQTNFAGIAVSISLLVLLLGLSFSSKPFPSSPLRLFTAQELALHNGANDSLPILLAILGSVFDVTKGKSHYGLGGGYNHFSGRDASRAFVSGNFSGDGLTDSLRGLSSTEVKSVVEWRDFYFRSYIFVGKLVGLYYDSHGNPTKQLKGVEAKAARGAQLLEKQKSEEAKLPSCNSRWSQDEGGKVWCDNGYPRLIQRPLEIALTGKMSKRCACFKEDQLGQQGLEVYQGCDYHAKVCQV* 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10594830 10608680 + Vvi2g765 Vvi2g765 783464

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g765 251 Gene3D - 41 145 IPR036400 -
Vvi2g765 251 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 41 144 IPR036400 -
Vvi2g765 251 SMART Cyt_b5_2 48 144 IPR001199 -
Vvi2g765 251 PANTHER NEUFERRICIN 19 246 - -
Vvi2g765 251 Pfam Cytochrome b5-like Heme/Steroid binding domain 49 121 IPR001199 -
Vvi2g765 251 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 19 246 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g765 - - - vvi:100267661 476.478
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g765 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012706 1 1 1 1 1 0 1 0 0 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 26