Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g768 | ATGTCTATAAATAGAGATTTGAATAACATTAATTTCTTGCTCCCTGGAAAGATGGAACTTAACACCTTCCTCTTGCTTTGCATGCCACTCATCCTGTGCTTTTTCCTCCTCCAATTTCTGCGCCCATCATCCCACGCTACCAAGCTACCGCCTGGCCCAACTGGCCTCCCTATTTTGGGCTCCCTACTGGAAATTGGCAAACTTCCTCATCGCTCACTTGCAAGATTGGCCAAAATCCACGGCCCTCTCATCACTCTCCGCCTTGGCTCCATCACCACCGTCGTCGCCTCCTCTCCCCAGACAGCCAAACTAATTCTCCAAACACATGGCCAGAACTTCCTGGACCGTCCTGCTCCCGAGGCCCTCGACAGTCCTCAAGGCACAATCGGATGGATTCCTGCGGACCATAGCCTGGACTCACTCCAACACCTTCGATACAAAAAGGTGGAACAACTTCTCCAACATATCCGTAAGCACTGTGTTTCCGGTACACCGGTGGATATCGGCCTACTCACCTCTGCCATCAACTTGAACCGCGACACTTTCTCATCTTATAAACGGCTTTATGAAATAGTTGGTGGTATAATCAAAAGCCGTATCAAGTGTAGAGCCTCCAATCCGATGAGCAGGAATGACGACTTCTTGGATGTGATTCTTGATCAGTGCGAAGAAGATGGCTCTGTTTTCAATTCTGATAATATCCAGGTTTTGATTGTGGAACTATTTTATGCTGGAAGTGATACATCTACCATAACAACTGAATGGGCAATGACTGAACTTCTTCGAAATCCTCGGCTGATGCAAAAGGTTCGGCAAGAACTTAGCGAAGTAATCGGGGCAGGTCAAATGGTTAGAGAATCAGATATGGATCGACTTCCATATTTTCAAGCTGTTGTGAAAGAGACACTTAGACTCCATCCGGCTGGGCCTCTTCTGTTACCTTTTAAAGCAAAGAATGATGTGGAATTATGCGGTTTCACCATACCCAGTAACAGTCATGTCATCGTCAATATGTGGGCTATTGCAAGAGATCCAAGTTATTGGGAGGATCCTTCATCCTTCCTTCCCGAAAGATTTTTGGGCTCTAAGATAGATTATAGAGGCCAAGATTATGAATATATACCATTTGGAGCAGGTAGGCGAATCTGCCCAGGCATACCTCTTGCCATCAGAATGGTTCAACTAGTGTTAGCTTCCATTATCCACTCCTTCAACTGGAAGCTTCCTGAAGGAATCACTCCACTGACCATTGACATGCAAGAAAAATGCGGAGCTACCTTGAAGAAGGCCATTCCTCTTTCTGCCATTCCATTTATCGAAGAAAATTAA | 1329 | 45.75 | MSINRDLNNINFLLPGKMELNTFLLLCMPLILCFFLLQFLRPSSHATKLPPGPTGLPILGSLLEIGKLPHRSLARLAKIHGPLITLRLGSITTVVASSPQTAKLILQTHGQNFLDRPAPEALDSPQGTIGWIPADHSLDSLQHLRYKKVEQLLQHIRKHCVSGTPVDIGLLTSAINLNRDTFSSYKRLYEIVGGIIKSRIKCRASNPMSRNDDFLDVILDQCEEDGSVFNSDNIQVLIVELFYAGSDTSTITTEWAMTELLRNPRLMQKVRQELSEVIGAGQMVRESDMDRLPYFQAVVKETLRLHPAGPLLLPFKAKNDVELCGFTIPSNSHVIVNMWAIARDPSYWEDPSSFLPERFLGSKIDYRGQDYEYIPFGAGRRICPGIPLAIRMVQLVLASIIHSFNWKLPEGITPLTIDMQEKCGATLKKAIPLSAIPFIEEN* | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10833511 | 10835788 | - | Vvi2g768 | Vvi2g768 | 783467 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g768 | 442 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 376 | 385 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi2g768 | 442 | PRINTS | P450 superfamily signature | 244 | 261 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | P450 superfamily signature | 297 | 308 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | P450 superfamily signature | 374 | 383 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | Gene3D | Cytochrome P450 | 177 | 434 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | Gene3D | Cytochrome P450 | 38 | 176 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | E-class P450 group I signature | 337 | 361 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | E-class P450 group I signature | 373 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PRINTS | E-class P450 group I signature | 383 | 406 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 24 | 178 | - | - | |
Vvi2g768 | 442 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 179 | 438 | - | - | |
Vvi2g768 | 442 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 24 | 178 | - | - | |
Vvi2g768 | 442 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 179 | 438 | - | - | |
Vvi2g768 | 442 | SUPERFAMILY | Cytochrome P450 | 50 | 434 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | Pfam | Cytochrome P450 | 138 | 424 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g768 | 442 | Pfam | Cytochrome P450 | 50 | 135 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g768 | - | - | vvi:100264388 | 800.045 |