Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g768 ATGTCTATAAATAGAGATTTGAATAACATTAATTTCTTGCTCCCTGGAAAGATGGAACTTAACACCTTCCTCTTGCTTTGCATGCCACTCATCCTGTGCTTTTTCCTCCTCCAATTTCTGCGCCCATCATCCCACGCTACCAAGCTACCGCCTGGCCCAACTGGCCTCCCTATTTTGGGCTCCCTACTGGAAATTGGCAAACTTCCTCATCGCTCACTTGCAAGATTGGCCAAAATCCACGGCCCTCTCATCACTCTCCGCCTTGGCTCCATCACCACCGTCGTCGCCTCCTCTCCCCAGACAGCCAAACTAATTCTCCAAACACATGGCCAGAACTTCCTGGACCGTCCTGCTCCCGAGGCCCTCGACAGTCCTCAAGGCACAATCGGATGGATTCCTGCGGACCATAGCCTGGACTCACTCCAACACCTTCGATACAAAAAGGTGGAACAACTTCTCCAACATATCCGTAAGCACTGTGTTTCCGGTACACCGGTGGATATCGGCCTACTCACCTCTGCCATCAACTTGAACCGCGACACTTTCTCATCTTATAAACGGCTTTATGAAATAGTTGGTGGTATAATCAAAAGCCGTATCAAGTGTAGAGCCTCCAATCCGATGAGCAGGAATGACGACTTCTTGGATGTGATTCTTGATCAGTGCGAAGAAGATGGCTCTGTTTTCAATTCTGATAATATCCAGGTTTTGATTGTGGAACTATTTTATGCTGGAAGTGATACATCTACCATAACAACTGAATGGGCAATGACTGAACTTCTTCGAAATCCTCGGCTGATGCAAAAGGTTCGGCAAGAACTTAGCGAAGTAATCGGGGCAGGTCAAATGGTTAGAGAATCAGATATGGATCGACTTCCATATTTTCAAGCTGTTGTGAAAGAGACACTTAGACTCCATCCGGCTGGGCCTCTTCTGTTACCTTTTAAAGCAAAGAATGATGTGGAATTATGCGGTTTCACCATACCCAGTAACAGTCATGTCATCGTCAATATGTGGGCTATTGCAAGAGATCCAAGTTATTGGGAGGATCCTTCATCCTTCCTTCCCGAAAGATTTTTGGGCTCTAAGATAGATTATAGAGGCCAAGATTATGAATATATACCATTTGGAGCAGGTAGGCGAATCTGCCCAGGCATACCTCTTGCCATCAGAATGGTTCAACTAGTGTTAGCTTCCATTATCCACTCCTTCAACTGGAAGCTTCCTGAAGGAATCACTCCACTGACCATTGACATGCAAGAAAAATGCGGAGCTACCTTGAAGAAGGCCATTCCTCTTTCTGCCATTCCATTTATCGAAGAAAATTAA 1329 45.75 MSINRDLNNINFLLPGKMELNTFLLLCMPLILCFFLLQFLRPSSHATKLPPGPTGLPILGSLLEIGKLPHRSLARLAKIHGPLITLRLGSITTVVASSPQTAKLILQTHGQNFLDRPAPEALDSPQGTIGWIPADHSLDSLQHLRYKKVEQLLQHIRKHCVSGTPVDIGLLTSAINLNRDTFSSYKRLYEIVGGIIKSRIKCRASNPMSRNDDFLDVILDQCEEDGSVFNSDNIQVLIVELFYAGSDTSTITTEWAMTELLRNPRLMQKVRQELSEVIGAGQMVRESDMDRLPYFQAVVKETLRLHPAGPLLLPFKAKNDVELCGFTIPSNSHVIVNMWAIARDPSYWEDPSSFLPERFLGSKIDYRGQDYEYIPFGAGRRICPGIPLAIRMVQLVLASIIHSFNWKLPEGITPLTIDMQEKCGATLKKAIPLSAIPFIEEN* 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10833511 10835788 - Vvi2g768 Vvi2g768 783467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g768 442 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Vvi2g768 442 PRINTS P450 superfamily signature 244 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 Gene3D Cytochrome P450 177 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 Gene3D Cytochrome P450 38 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 24 178 - -
Vvi2g768 442 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 179 438 - -
Vvi2g768 442 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 24 178 - -
Vvi2g768 442 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 179 438 - -
Vvi2g768 442 SUPERFAMILY Cytochrome P450 50 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 Pfam Cytochrome P450 138 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g768 442 Pfam Cytochrome P450 50 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g768 Vvi15g523 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g768 - - vvi:100264388 800.045