Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g78 ATGGCAACAGATGTGACTTGTCCACCACCCACCAAGGCCACATCAAATGGGGTGTTCCAGGGGGATAATCCCGTTCATTTTGCCCTCCCTCTAGCTATTGTGCAGATATGCCTTGTAGTTGTGGTTACGCGCTGTCTTGCTTTTCTTTTGAAGCCACTGCGACAACCTCGTGTGATAGCAGAGATTGTTGGAGGAATATTACTTGGTCCATCAGCTCTGGGTCGCAACAAACACTATCTGCATTCCATTTTTCCACCAAAAAGCCTCACAGTGTTGGATACTCTGGCAAACCTTGGTCTTCTCTTCTTTCTATTCATTGTAGGCTTGGAGTTAGATCTCAAGTCCCTCCATCGCGCTGGAAAGAAAGCTCTTAGCATTGCTGTTGCAGGGATCAGCCTTCCTTTTGCTTTAGGAGTTGGTACATCTTTTGTCCTCAGAGCAACCATTTCCAAGGGTGTAGATGCAGGTCCATTTGTTGTATTCATGGGGGTGGCCCTCTCTATCACTGCCTTCCCTGTTTTGGCCCGTATTCTTGCAGAGCTCAAGCTTTTAACCACTGATGTTGGTCAAATGGCCATGTCTGCTGCTGCTGTCAATGATGTGGCTGCATGGATTCTACTTGCTCTTGCCATTGCTCTCTCTGGCACTGGTCGTTCCCCCATAATCTCATTATGGGTGTTCTTGTGTGGATTTGGTTTTGTCCTGTGCTGTTCACTCATTGCCCCACGAATCTTCAGATGGATGGCTCAGCGTTGCCCTGAGGGTGAGCCAGTGGACGAGATGTATATATGTGCTACTTTAGCTGCTGTTTTGGCAGCTGGGTTTGTTACTGATGCCATTGGGATTCATGCTCTTTTTGGTTCTTTTGTGATGGGAATTCTTGTGCCCAAAGAAGGTCCTTTTGCAAGTGCTCTTGTGGAAAAAGTTGAGGACCTTGTTTCTGGCCTCCTCCTTCCGTTGTACTTTGTCTCAAGTGGATTGAAGACTGATGTGTCCACCATTAGGGGGCTTCAATCATGGAGTCTCCTTGTTTTGGTCATATTTACAGCCTGTTTGGGGAAGATTGCAGGCACCATTGCTGTCTCCGTCTGTTGCAGAATGCCTGTTCGGGAGGCTCTTGCTCTGGGGTTCCTAATGAACAGCAAGGGCTTGGTGGAGCTCATTGTACTCAACATTGGCAAAGAGAGAAAGGTATTGAATGATCAAACATTTGCAATCATGGTTCTGATGGCTCTCTTCACAACCTTTATCACAACACCTCTAGTTATATCAGTATACAAGCCAGCTAAAAGGCCAAGTAAAGCAGATTACAAGCACAGGACAATTGATAGAAAGAACCCCAATGGTGAACTTCGAATCTTGGTCTGTTTCCGAAGTACAAACAACATTCCTACAATGATCAATCTCATTGAGACTTCACGTGGGACGGGGAAGAGGGAAGGACTTTGTGTTTATGCAATGCACCTCATGGAGCTCTCAGAGAGGTCATCTGTAATATCGATGGTTCACAAGGCAAGAAAGAATGGGCTACCATTTTGGAACAAGGGACTACCACCAGAAGTGAATTCAGCTTGGTCAACAGAAAGGTCCTCGAGCACGCTCCATGCTCTGACTGGTCCTCCAGTAGCAGCTTTTCCCACAACAGGGCTGACCCCACCCACTTCTCCCAACTCCCTTCTGAGATTTAGATTTTTGTCGTTTTTCTCTTCTTTATTTCCTTCTTCTGGTGCAACCCCCCTCTCTTTGTCCTTTTCTCTCAGAATCGCACGGATAGTGAAAAAAATCCCCAGTTGTAGACACCTTTTTTTTAAAGTCGTGAGAGTCATCGAACCTAAAATGGACAACCCTCAAACCTAA 1857 46.26 MATDVTCPPPTKATSNGVFQGDNPVHFALPLAIVQICLVVVVTRCLAFLLKPLRQPRVIAEIVGGILLGPSALGRNKHYLHSIFPPKSLTVLDTLANLGLLFFLFIVGLELDLKSLHRAGKKALSIAVAGISLPFALGVGTSFVLRATISKGVDAGPFVVFMGVALSITAFPVLARILAELKLLTTDVGQMAMSAAAVNDVAAWILLALAIALSGTGRSPIISLWVFLCGFGFVLCCSLIAPRIFRWMAQRCPEGEPVDEMYICATLAAVLAAGFVTDAIGIHALFGSFVMGILVPKEGPFASALVEKVEDLVSGLLLPLYFVSSGLKTDVSTIRGLQSWSLLVLVIFTACLGKIAGTIAVSVCCRMPVREALALGFLMNSKGLVELIVLNIGKERKVLNDQTFAIMVLMALFTTFITTPLVISVYKPAKRPSKADYKHRTIDRKNPNGELRILVCFRSTNNIPTMINLIETSRGTGKREGLCVYAMHLMELSERSSVISMVHKARKNGLPFWNKGLPPEVNSAWSTERSSSTLHALTGPPVAAFPTTGLTPPTSPNSLLRFRFLSFFSSLFPSSGATPLSLSFSLRIARIVKKIPSCRHLFFKVVRVIEPKMDNPQT* 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 814054 819061 - Vvi2g78 Vvi2g78 782777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g78 618 PANTHER CATION/H(+) ANTIPORTER 17 6 522 - -
Vvi2g78 618 Pfam Sodium/hydrogen exchanger family 37 420 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi2g78 618 Gene3D - 31 435 IPR038770 -
Vvi2g78 618 PANTHER CATION/H + ANTIPORTER 6 522 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g78 - - vvi:100253481 994.571