Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g789 ATGATTAAATACTTAAATCCAAAGAAGAAGAGTCTAAAAGTCAGTGAGATGGAACTTCAAATCGCCTTGCTCCTGCTTTGCATCACACTCTTCTGTTTCTGCCTCCGCCACTTTCTCTTGCCATCATACACTGCAAAGCTACCACCCGGTCCAACTGGCCTTCCCATCTTGGGCTCACTGCTTCAACTCGGTGAAAAACCCCACCACACACTTGCAAAATTCGCTGAATCCCACGGCCCTCTCATCTCTCTCCGCCTCGGCTCCATCACCACCGTGGTCGCTTCCTCCCCTCAAACAGCCAAACTAATCCTCCAAAACCATGCTGACAACTTCTTGGATCTTTGCGCTTCTCACATGTTCACTACTCAGAGACTCGACTCACTCCAACACCTGCGGCAGAAAAAAGTGGACCAACTCCTCCAACACATCACAAAACACTGTGTTTTGGGAACACCGGTATACATTACCGATCTCGCCTCAGCCACCATCTTGAACTTGATGTCAAACACCATGTTCTCCGTTGACCTTGTTGATCCAAGATTCGAGTCAGCTCAGGAGTTCAGGGAGCTGATGTGGAGAATTATGGAGGGTGTTGGGAAGCCCAACATTTCAGATTATTTTCCCATATTCCGGAGTTTGGACTTGCAAGGTGTGAAGCGTGGCACCGTTCCATCCTACAAAAGACTCCATGAGATACTTGATGGGATCATCCAAGAACGCATGAAACTTAGAGCCTCCAGTTCCACCACCAGCATGAATGATTTCTTGGATGTGCTTCTTGATCAGTGCCAAGTGGATGGCTCTGATTTCAGTTCTGATACTATCAAGACTTTACTTGTGGAACTAGTCTTTGGTGGAAGTGATACTTCTTCAGTAACAATCGAGTGGGCAATGGCTGAACTTCTTCGCAATCCTCATGTGATGCAAAAGGACAGTCATGTTCTAGTGAATATTTGGGCTATTGCAAGAGATCCAGGATACTGGGAGGATCCATTGTCATTCCTTCCTGAAAGATTCTTGAGTTCTAACATAGATTTTAGAGGTCAAGATTTTGAATACCTACCATTTGGAGCAGGTAAGCGAATCTGCCCAGGCATATCCCTTGGTCTAAGAATGGTTCATTTAGTACTAGCTTCCATTATTCATTCGTTCAGTTGGAAGCTTCCTCAGGGAATCACTCCGGAGAGCCTCGACATGAAGGAGCAGTTTGGAGTTACCCTGAAAAAGGTCTATATACAAAGGAACTCAAACACAAAAGAGGGAAGGAAGAAGAGTCTAAAAGTCAGTGAGATAGAACTTCAAATCGTCGTGCTCCTGCTTTGCTTCACACTCTTCTGTTTTTGTCTCCACCACTTTCTCTTGCCATCATACACTGCAAAGCTACCACCTGGTCCAACTGGCCTTCCCATCGTGGGTTCACTGCTTCAACTCGATGAAAAACCCCACCACTCACTTGCAAAATTCACGGAATCCCACGACCCTCTCATCTCTCTCCGCCTCGGCTCTATCACCACCATGGTCGCTTCCTTCCCTCAAACAACCAAACCAATCCTCCAAAACCATGTTGACAACTTCTTGGATCATCCTGTTCCTGATGCTATCATGGCAATGCCTAATCTTGAATACACACTTGCTTGGATCCCTGGTGACCATGTGTGGCACAACCGCCGCAGAGTTTGCGCTTCTCACTTGTTCACTACTCAAAGACTCGACTCACTCCAACACCTGCGGCAGAAAAAAGTGGACCAACTCCTCCAACACATCACAAAACACTGTGTTTTGGGAACACCGGTATACATTACCGATCTCGCCTCAGCCACCATCTTGAACTTGATGTCAAACACCATGTTCTCCATTGACCTTGTTGATCTAAGATTCGAGTCAGCTCAGGAGTTCAGGGAGCTGATGTGGAGAATTATGGAGGGTGTTGGGAAGCCCAACATTTCAGATTATTTTCCCATATTCCGGAGTTTGGACTTGCAAGGTGTGAAGCGGGGCACCGTTCCATCCTACAAAAGACTCCATGAGATACTTGATGGGATCATCCATGAACGCATGAAACTTAAAGCCTCCAATTCCACCACCAGCATGAATGATTTCTTGGATGTGCTTCTTGATCAGTGCCAAATGGATGGCTCTGATTTCAGTTCTAAAACTATCAAGACTTTGCTTGTGGAACTAGTCTTTGGTGGAAGTGATACTTCTTCAATAACAATCGAGTGGGCAATGGTTGAACTTCTTCGTAATCCACATACAATGAGATTCCATCCGCTTGCTCCTCATCTCTTACCATATAAGGCAAAGTATTACCTAGAAATATTGGGTTTCACCATACCGAAGGACAGTAATGTTTTAGTGAATATTTGGGCTATTGCAAGAGATCCAAGATACAGGGAGGATCCATTATCATTCCTTCCTGAAAGATTCTTGAGCTTTAACATAGATTTTAGAGGTCGAGATTTTGAATACCTACCATTTGGAGCAGGTAAGCGAATCTGCCCAGGCATACCCCCTGGTCTAAGAATGGTTCACTTCGTACTAGCTTCCATTATTCATTCGTTCAGTTGGAAGTTTCCTCAGGGAATCACTCTGGAGAGCCTCAACATGAAAGAGCAGTTTGGAGTTACCCTAAAAAAGGTCATTCCCCTTTGCGCCATTCCATTTATAGAAGAAAAATGTTCTCAATAA 2688 45.09 MIKYLNPKKKSLKVSEMELQIALLLLCITLFCFCLRHFLLPSYTAKLPPGPTGLPILGSLLQLGEKPHHTLAKFAESHGPLISLRLGSITTVVASSPQTAKLILQNHADNFLDLCASHMFTTQRLDSLQHLRQKKVDQLLQHITKHCVLGTPVYITDLASATILNLMSNTMFSVDLVDPRFESAQEFRELMWRIMEGVGKPNISDYFPIFRSLDLQGVKRGTVPSYKRLHEILDGIIQERMKLRASSSTTSMNDFLDVLLDQCQVDGSDFSSDTIKTLLVELVFGGSDTSSVTIEWAMAELLRNPHVMQKDSHVLVNIWAIARDPGYWEDPLSFLPERFLSSNIDFRGQDFEYLPFGAGKRICPGISLGLRMVHLVLASIIHSFSWKLPQGITPESLDMKEQFGVTLKKVYIQRNSNTKEGRKKSLKVSEIELQIVVLLLCFTLFCFCLHHFLLPSYTAKLPPGPTGLPIVGSLLQLDEKPHHSLAKFTESHDPLISLRLGSITTMVASFPQTTKPILQNHVDNFLDHPVPDAIMAMPNLEYTLAWIPGDHVWHNRRRVCASHLFTTQRLDSLQHLRQKKVDQLLQHITKHCVLGTPVYITDLASATILNLMSNTMFSIDLVDLRFESAQEFRELMWRIMEGVGKPNISDYFPIFRSLDLQGVKRGTVPSYKRLHEILDGIIHERMKLKASNSTTSMNDFLDVLLDQCQMDGSDFSSKTIKTLLVELVFGGSDTSSITIEWAMVELLRNPHTMRFHPLAPHLLPYKAKYYLEILGFTIPKDSNVLVNIWAIARDPRYREDPLSFLPERFLSFNIDFRGRDFEYLPFGAGKRICPGIPPGLRMVHFVLASIIHSFSWKFPQGITLESLNMKEQFGVTLKKVIPLCAIPFIEEKCSQ* 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12817477 12826831 - Vvi2g789 Vvi2g789 783488

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g789 895 Pfam Cytochrome P450 308 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Pfam Cytochrome P450 752 875 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Pfam Cytochrome P450 120 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Pfam Cytochrome P450 462 752 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Pfam Cytochrome P450 48 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Gene3D Cytochrome P450 456 752 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Gene3D Cytochrome P450 753 886 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 437 753 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 23 111 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 113 310 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 310 410 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 752 888 - -
Vvi2g789 895 SUPERFAMILY Cytochrome P450 457 884 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 113 310 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 23 111 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 437 753 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 310 410 - -
Vvi2g789 895 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 752 888 - -
Vvi2g789 895 Gene3D Cytochrome P450 42 309 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 Gene3D Cytochrome P450 310 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS P450 superfamily signature 730 747 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS P450 superfamily signature 824 833 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 787 811 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 823 833 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 PRINTS E-class P450 group I signature 833 856 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g789 895 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 826 835 IPR017972 GO:0005506|GO:0016705
Vvi2g789 895 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 356 365 IPR017972 GO:0005506|GO:0016705
Vvi2g789 895 SUPERFAMILY Cytochrome P450 43 408 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g789 - - - vvi:100263035 811.216
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g789 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4