Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g804 ATGCATCAAATATATATATATATAGCCTCCCCTATTCTAGGAAAGGATAATTTTTTATACACACCTTGCCCAATCCAAAGCAAAAATTTCAACCACGATTATTTAATTCTGAGGGTGGGTTGCAGGTATTTTCACTTTGTCAAAGGATACCTAAAACCGGTTCTGACAAAGGTAGCTGAGAAAGTAATTTCAAGTTATTATCAACTCCAAAGAAGATCTGCAACACATAATGCAGCAAGAACAACCGTGCGCATGCTAGGAAGCTTGATACGATTAGCCCAAGCACATGCAAGACTGATGTTCAGAAATGAGGTCACCAGACTAGATGCCATCACAGCCATTCTCTGCATTGAATCATCCATGACCACCTCGGCCATTGTGGACAGTGTCGGGAATGCCCTGCACTCCAATTTAACAGAGAATCCTGATCAAGAATATGCCAAGCAAGAGAGGTTGATCCTGGAGAAGCTGAGTTCTATGGATGAATTTCCGAACATATGGATCAATAACCGGATGAGAATGGACGTCGAACAAGCTGCGGCTCATGAGCAGGCGGGTGTTTAA 564 42.38 MHQIYIYIASPILGKDNFLYTPCPIQSKNFNHDYLILRVGCRYFHFVKGYLKPVLTKVAEKVISSYYQLQRRSATHNAARTTVRMLGSLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDSVGNALHSNLTENPDQEYAKQERLILEKLSSMDEFPNIWINNRMRMDVEQAAAHEQAGV* 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13526996 13528253 - Vvi2g804 Vvi2g804 783503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g804 187 Gene3D - 26 126 IPR027417 -
Vvi2g804 187 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 13 160 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vvi2g804 187 Pfam MCM AAA-lid domain 42 121 IPR041562 -
Vvi2g804 187 PANTHER DNA HELICASE MCM9 13 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g804 K10738 - vvi:100243188 229.565