Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g839 ATGGCACCAACACCAGTTTCACTAAATACCGGCCTGACCAAAGTGAATGGAAATGCACTCTCTCATTTTTGTTGCAGGTGGAAGAGAGAAAATTCAAAGCAAATGCGAAGGATGATCGGCGTTTATCAAGACGCCTTTGGTTGCGTCTCTGGTTTTAGAAAAATGGAGGCTTCCCGCAACCAGAATGCCTCAAGTTCTTTCCATTTTCACTCAAATCTCTCATTTATGTCACCCTCGCGTGGTTGGGTGATAATGGCAAAGGTTCAAGGGCGTGAGTGGAGTCGGAAAAGATGCAGCATCTACCCCTTATATTGCTATTATCACGGTGATGCTCCATTCACAATCTCTTGGTGCATAATTTTCCCCAACTACTATGATATGGGATTCAGGGGCTTGCTGCAGCTTGGTTATAAAGAATTGCGTTATGAGCTAATAACGTGGATAGTGGCCAATTACGACATTGGCTACCACCACTTATGCATGGCAACAAGAGTTGTTGTCCCAGTCACGCCCAAAGATGTTAGAGAGGTGCTAGGCATCCCGGACAATGGCGTTGACATTCTCATCTACAATAGGCGTGGCACACCCAATCGCACATACGACATCAAAATATTGGAAGCTAATTTGCGTGATCTACCAGTTGGCGAAGAATTCATGAAATCCTTCCTCATTTTCGCCTGTGCCACTATCCTTGCCCCCAACTCAAAACAAGAAGGTATGCATGACTTGTGGGACACGGTTTGGGATAGTGAAGTGGGGGTGCGCAAAAATTGGGCCAAGTTTGTTCTCCAATATGTCGAGGATGGGATAAGGGACTATCGTACAAGTCACCCGACATATATTAGAGGTTGTGTCTTGTTTCTTCAGCTTTTCTATATCAGCAAGTTCTATATGACGACTTTCCAAGTTGAAGTCTGCAGTCCACTTTCGGCTGCATGGACAGATGAGCAAGTCAAGAGGCGCTTGGCTGCCGAAATACACACCTATGGCAATTATGGCCATGTCCAGGTCATACAGGGAAGCACACCTTCTGCACATAATGATGGACATCCATATGAGACGGGTTGCTCACACTCTGATGACCCAACTGAGACCATTGAAGCACGGCTAAGTCGGAATTCTGAACATCTTATGAGCCTTGCTTCATCTGTGGCACAAGACATTGCCACACTACGTGCAAGGTCCACTGGAGGACAAAGTGGGTGTGCACTCACCCCACCACAAGAAGTTGTGAATGTAGAAAGAAAGAAAGACGAGGGAAGCACCGGTGTGCATCCTTGTAGTGATGAAATGATGAGAAAAGGATCCGGTGCCGCAAGCACTCATTCTGGCCAGCAAAGAGTCACCGATGCAGCAGTAGATGATGACCCATGTATTGACCACGCCACATTCCCACCTTCACAAAAGAGTGCTGAATTGCAATCACTTGAAGGGGTGCAAATTGGAGTTCAAGAAGGCCGTGGCAGCAAAGAGCCTTCTCCTACCCCTAGGTTGGTTGCGGATTATGCGTTGTTCGAAGATGGTGAGCCAAGCGAGATCTTGTGCGATATGCATGGCACATATATAACACGGGATGAGCTTTCTTCGCTCAATGGAGGCCGTTGGGTAAATAGTGCGATTGTCGGACTGGTCTGCCGAATGATGAATGCAGAACAAGATATACCACCGCGTGCACACTATTTCGACCCATCATTCTTCGTGGTGCTAGCCAGCCTTACGCCAAATGCCAAAAAGCATGAAATCAAAGAGCGGTGTCGGATGTTCCTTCATGCTGAATTTGTGGGCCATGATTTCTCTAGTTGTGATATGCTATTTTTTCCCGTCTGCGACAACAACCATTGGCACGTGCATGTGGTCAATATTCCAGCTTCAAGGGTCGACATCTTATCTTCGTTGCCTTTAAGAAGGGGTAACGGGATAAGTGCCGTATCGAGACGCTTGTCTGATGCAATTGATCAAGCATTCCATGCTCATGGCATGCTCAGGCGAGTGGAGGTCTCAAAATTCCAGCATGTGCAACCCCAAATTGTGCAACAACTAAATGGATATGATTGTGGCATGTTCGCAATCAAGTACATGGAACATTGGAATGGGGCGACACTAGCACATTCAATTGCGGAGGACAAGATGCATCTATATCGACTGAGGCTGGTCGTTACTTTGGTTACTAATGCGGCAAACAATGCTAAAGATAAGGTCTTGAAGGCGTGTCGAATTTGA 2220 46.62 MAPTPVSLNTGLTKVNGNALSHFCCRWKRENSKQMRRMIGVYQDAFGCVSGFRKMEASRNQNASSSFHFHSNLSFMSPSRGWVIMAKVQGREWSRKRCSIYPLYCYYHGDAPFTISWCIIFPNYYDMGFRGLLQLGYKELRYELITWIVANYDIGYHHLCMATRVVVPVTPKDVREVLGIPDNGVDILIYNRRGTPNRTYDIKILEANLRDLPVGEEFMKSFLIFACATILAPNSKQEGMHDLWDTVWDSEVGVRKNWAKFVLQYVEDGIRDYRTSHPTYIRGCVLFLQLFYISKFYMTTFQVEVCSPLSAAWTDEQVKRRLAAEIHTYGNYGHVQVIQGSTPSAHNDGHPYETGCSHSDDPTETIEARLSRNSEHLMSLASSVAQDIATLRARSTGGQSGCALTPPQEVVNVERKKDEGSTGVHPCSDEMMRKGSGAASTHSGQQRVTDAAVDDDPCIDHATFPPSQKSAELQSLEGVQIGVQEGRGSKEPSPTPRLVADYALFEDGEPSEILCDMHGTYITRDELSSLNGGRWVNSAIVGLVCRMMNAEQDIPPRAHYFDPSFFVVLASLTPNAKKHEIKERCRMFLHAEFVGHDFSSCDMLFFPVCDNNHWHVHVVNIPASRVDILSSLPLRRGNGISAVSRRLSDAIDQAFHAHGMLRRVEVSKFQHVQPQIVQQLNGYDCGMFAIKYMEHWNGATLAHSIAEDKMHLYRLRLVVTLVTNAANNAKDKVLKACRI* 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14622644 14635079 - Vvi2g839 Vvi2g839 783538

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g839 739 MobiDBLite consensus disorder prediction 415 444 - -
Vvi2g839 739 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 471 723 - -
Vvi2g839 739 ProSiteProfiles Ubiquitin-like protease family profile. 520 696 IPR003653 GO:0006508|GO:0008234
Vvi2g839 739 Gene3D Adenoviral Proteinase; Chain A 499 725 - -
Vvi2g839 739 Pfam Ulp1 protease family, C-terminal catalytic domain 534 695 IPR003653 GO:0006508|GO:0008234
Vvi2g839 739 SUPERFAMILY Cysteine proteinases 504 723 IPR038765 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g839 - - - vvi:100253832 1162.52
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g839 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .