Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g841 ATGCTGACGTGTATATCGTGCTCGAAGCAAACGGAGGAGGATGGGAGAGGAGAGGAGGGCAGTGGAGGTGGGGCGCGTGGGACACCAAGTACAAAAGAAGCCGTCAAAAGCCTGACGGCGCAGATCAAGGATATGGCCTTGAAATTCTCGGGTGCTTACAGGCAATGCAAGCCCTGCACTGGGTCCAGCAGCTACAAGAAGGGACACCGGCCTTATCCTGACTTTGATACCATTTCAGAAGGGGTTCCGTACCCCTACTTAAGGCCGGGGAGCTCAAGCTCAACGCCTGCATGGGATTTCACAACCAGCAGCCATAACCCTGGTGCAGGGTCTGACTCAAGGTTCACTGGGGTGTTGAGAGGTGATCAGACGCCCGGAGGGGTGTCCATCTCGGCTCAGTCTTGTGATGTTGTGCTGGAGGATGAGGATGAGCCCAAAGAGTGGATGGCTCAGGTTGAGCCTGGAGTTCACATCACTTTTGTGTCCCTCCCCCATGGGGGAAATGACTTAAAACGGATCCGTTTCAGCCGGGAGATGTTTAATAAATGGCAAGCTCAGCGATGGTGGGGAGAGAATTATGACCGGATCATGGAGCTGTACAATGTCCAGAGATTCAACCGCCAAGCTCTACACACTCCTCCTAGGTCTGAGGACGAGAGAGATTCATCTTACTCGAGGATGGGATCGGCAAGGGAAAGCCCTATGACTCCATCACTAAACAAGGAATGGATTCCGAGGAACTATTATAAACCATCTGGAAGCGGCCCAAGGGGCGAGACATCTTCCATGGATGCTTCACGGACAACAACCTCATCTAGGGATGAGGCGTCAGTTTCCATTAGCAATGCCAGTGACATGGAGACTGAGTGGGTTGAGCAAGATGAACCAGGAGTCTACATTACCATCAGACAGTTGGCTGATGGCACAAGGGAGCTTCGGCGCGTCAGATTCAGCCGTGAAAGATTTGGTGAGGTCCATGCAAAGACGTGGTGGGAAGAGAATCGAGAGAGAATACAAGCTCAATACCTCTAA 1032 52.33 MLTCISCSKQTEEDGRGEEGSGGGARGTPSTKEAVKSLTAQIKDMALKFSGAYRQCKPCTGSSSYKKGHRPYPDFDTISEGVPYPYLRPGSSSSTPAWDFTTSSHNPGAGSDSRFTGVLRGDQTPGGVSISAQSCDVVLEDEDEPKEWMAQVEPGVHITFVSLPHGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDERDSSYSRMGSARESPMTPSLNKEWIPRNYYKPSGSGPRGETSSMDASRTTTSSRDEASVSISNASDMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVHAKTWWEENRERIQAQYL* 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14819756 14824676 + Vvi2g841 Vvi2g841 783540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g841 343 MobiDBLite consensus disorder prediction 211 226 - -
Vvi2g841 343 Pfam Transcription factor BRX N-terminal domain 28 59 IPR027988 -
Vvi2g841 343 MobiDBLite consensus disorder prediction 254 286 - -
Vvi2g841 343 PANTHER PROTEIN BREVIS RADIX-LIKE 1 343 - -
Vvi2g841 343 MobiDBLite consensus disorder prediction 7 33 - -
Vvi2g841 343 ProSiteProfiles BRX domain profile. 288 343 IPR013591 -
Vvi2g841 343 MobiDBLite consensus disorder prediction 210 286 - -
Vvi2g841 343 Pfam Transcription factor regulating root and shoot growth via Pin3 287 342 IPR013591 -
Vvi2g841 343 Pfam Transcription factor regulating root and shoot growth via Pin3 146 200 IPR013591 -
Vvi2g841 343 ProSiteProfiles BRX domain profile. 146 201 IPR013591 -
Vvi2g841 343 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 343 IPR044532 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g841 - - vvi:100246485 657.907