Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g933 ATGGCTGGACAGTCCAGAAAATGGATGATCCTTGTGGCAACCATATGGATTCAGGCGTTTACAGGGACGAATTTTGATTTCTCGGCCTACTCGTCGGAGCTGAAGACGGTGTTGGGGGTGTCTCAGGTGCAGTTGAACTATTTGGCGACGGCGTCGGATTTAGGGAAACTGTTTGGGTGGTCTTCTGGGCTGGCTTTGATGTATATGCCATTGTGGGTTGTGATGTTCATGTCTGCTTTCATGGGGTTTTTTGCGTATGGCCTTCAGTGGCTTGTTATCAGGAGTATCATTACCTTGCCATACTTTCTGGTGTTTCTTCTATGTTTATTAGCTGGCTGCAGCATCTGTTGGTTCAACACAGTGTGCTTTGTTCTTTGTACTCAGAATTTCCCTGCAAATCGCCCTCTTGCAATCTCTCTCACCGTCAGCTTCAATGGCGTAAGCGCAGCACTATATGCCCTTGCTGCCGATGCCATTAACCCTTCTTCAGATTCACTGTATCTTCTTCTGAATGCCGTAATTCCTCTTCTCACTTCCATTGTTGCCCTTCCCCCAATCCTCCGCCAACCCTCTTTAGACCCTCTTCCTCCTGATGCCGTTCGCCGCGACTCCCTTATATTCCTCATACTGAATTTCTTGGCTGTCCTCACAGGCGTCTATCTCCTTCTCATTAGCTCAATTTCATCCAATGCAACAACATCTCGTCTCCTCTTTTCTGGGGCCATTTTTCTTCTTGTCCTCCCCATATGTATCCCTGGTGTTGTTTATGCTAAGAACTGGTTTCGGAGAACCCTCATCACACGATCAGGCAATCAGTTGGTAATGCTTGGAGAAGAACATCGAGCTCGTATGCTTGTTCGTAGGTTGGATTTTTGGCTATACTACATTGCTTACTTCTGCGGGGGAACGATAGGGCTGGTGTATAGTAACAACCTAGGGCAGATTGCACAGTCTCTTGGCAATAGCTCTGACACTTCAGCTCTAATCACTATCTATTCTGCCTTCTCCTACTTTGGCCGCTTGCTTTCTGCCGCTCCTGATTACATGCGTGCGAAGGTCTACTTTGCAAGAACCGGGTGGCTTAGTATAGCGCTTCTGCCAACCCCAGTTGCCTTCTTCTTGCTTGCGGCATCAGGCAGCAGCGGCAGCATCTTGCACGCAAGCACCGCACTGGTAGGGCTAAGCTCAGGGTTCATATTTGCCGCGGCTGTTTCAATAACATCAGAGCTGTTTGGACCCAATAGCGTGGGAGTCAACCACAACATTCTCATCACCAACATACCAATAGGCTCCCTTGTGTATGGCATGCTTGCTGCAATAATCTATGATGCCAACATAGGCTCCAGCTTAAGAATGGTTACTGATACAGCAGTGTGTATGGGTACGAGATGTTATTTCTTGACGTTTGTCTTGTGGGGAAGCCTCTCAGTTATAGGGCTAGTGTGCAGTGTGCTTCTATTCTTGAGAACTAGACATGCATATGATCGGTTTGAACACAATCGGATTTCATCGCAACTGTATTAA 1524 47.44 MAGQSRKWMILVATIWIQAFTGTNFDFSAYSSELKTVLGVSQVQLNYLATASDLGKLFGWSSGLALMYMPLWVVMFMSAFMGFFAYGLQWLVIRSIITLPYFLVFLLCLLAGCSICWFNTVCFVLCTQNFPANRPLAISLTVSFNGVSAALYALAADAINPSSDSLYLLLNAVIPLLTSIVALPPILRQPSLDPLPPDAVRRDSLIFLILNFLAVLTGVYLLLISSISSNATTSRLLFSGAIFLLVLPICIPGVVYAKNWFRRTLITRSGNQLVMLGEEHRARMLVRRLDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGNSSDTSALITIYSAFSYFGRLLSAAPDYMRAKVYFARTGWLSIALLPTPVAFFLLAASGSSGSILHASTALVGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSLVYGMLAAIIYDANIGSSLRMVTDTAVCMGTRCYFLTFVLWGSLSVIGLVCSVLLFLRTRHAYDRFEHNRISSQLY* 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17609689 17614854 - Vvi2g933 Vvi2g933 783632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g933 507 PANTHER NODULIN-LIKE/MFS TRANSPORTER 271 505 - -
Vvi2g933 507 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 265 - -
Vvi2g933 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 265 - -
Vvi2g933 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 271 505 - -
Vvi2g933 507 Pfam Nodulin-like 7 252 IPR010658 -
Vvi2g933 507 Gene3D MFS general substrate transporter like domains 281 497 IPR036259 -
Vvi2g933 507 SUPERFAMILY MFS general substrate transporter 239 492 IPR036259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g933 - - vvi:100263024 932.939