Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g937 ATGGCTAAAGCAAGAACAGGCCACTGGTTAAGCATTCTGGCATTTTCACTGATCTTGCTCAAAACAGAAGGCTTCTATGTGGGAATTACTTATGTGGATAGTGCAGTAGCAAAAGGAGCAGTTTGCTTGGATGGTAGCCCACCTGCTTACCACATGGATAAGGGATTTGGTGCAGGGATTAACAATTGGTTGGTTCATATTGAGGGAGGAGGATGGTGCAACAATGCCTCAACTTGCCTTGCTCGTAGGGACAACCGTTTAGGTTCATCGAAGCAAATGGTGAAGCAAATTGCTTTCTCTGGGATTCTGAGCAACAAGCAAAAATTTAATCCGGACTTCTACAACTGGAACAAGATCAAGGTTAGGTACTGCGATGGGGCCTCCTTTACGGGCGATGTAGAAGCAGTTGATCCTAAGACTAATCTTCACTACAGAGGAGCCCGGGTGTTTCTTGCTGTCATTGAGGATCTTATGGCAAAAGGAATGAAAAATGCTGCAAATGCTGTTCTCTCTGGCTGCTCTGCTGGTGGGCTGACTGCCATTCTGCATTGTGATAAATTTCGCGCTCTTCTCCCTGTCAGCACCAAAGTAAAATGCTTTGCAGATGCCGGTTACTTCATCAACGCTAAGGATGTTTCAGGAGCAGCACACATTGAAGGCTTCTACAGTGAAGTGGTTGCAACACATGGATCAGCAAAGAATCTGCCCCCATCCTGCACTTCAAGTCTAAGACCGGGCTTGTGTTTCTTCCCACAAAACATGGCTCAACAGATCAAAACACCGCTTTTTATCATCAATGCAGCCTATGATTCATGGCAGATAAAGAACATCTTGGCACCGGGTGTCGCTGATCCTCATGGTACTTGGCATTACTGCAAGCTTGATATCAAGGACTGCTCATCCTCCCAACTTGAAGCCATGCAAGATTTCAGGGTGCAGTTTCTTAGTGCAATCAAAGGACTGATAGGCTCCCCCTCCAAAGGAATGTTCATAAACTCCTGCTATGCCCACTGCCAAACCGAAATGCAGGAAACATGGCTGAGGGACGACTCCCCAGTACTTGGAAAAACAACAATTGCAAAGGCAGTAGGAGACTGGTACTATGACCGGAGTCCATTCCAGAAGATAGATTGTGCCTACCCTTGTGACTCTACTTGCCATAACCGGGTTTTTGATCCTCACGAACACCCAGAATTATAG 1200 46.25 MAKARTGHWLSILAFSLILLKTEGFYVGITYVDSAVAKGAVCLDGSPPAYHMDKGFGAGINNWLVHIEGGGWCNNASTCLARRDNRLGSSKQMVKQIAFSGILSNKQKFNPDFYNWNKIKVRYCDGASFTGDVEAVDPKTNLHYRGARVFLAVIEDLMAKGMKNAANAVLSGCSAGGLTAILHCDKFRALLPVSTKVKCFADAGYFINAKDVSGAAHIEGFYSEVVATHGSAKNLPPSCTSSLRPGLCFFPQNMAQQIKTPLFIINAAYDSWQIKNILAPGVADPHGTWHYCKLDIKDCSSSQLEAMQDFRVQFLSAIKGLIGSPSKGMFINSCYAHCQTEMQETWLRDDSPVLGKTTIAKAVGDWYYDRSPFQKIDCAYPCDSTCHNRVFDPHEHPEL* 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17728596 17733321 + Vvi2g937 Vvi2g937 783636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g937 399 PANTHER PECTIN ACETYLESTERASE 7 391 - -
Vvi2g937 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Vvi2g937 399 SUPERFAMILY alpha/beta-Hydrolases 143 272 IPR029058 -
Vvi2g937 399 PANTHER NOTUM-RELATED 7 391 IPR004963 GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g937 K19882 - vvi:100245856 836.639