Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g938 ATGGATTGGACTTTTGTACGTAAAGCTTGGGACAAGTGGATATCTACCAGTATAGGTTCTTCTGGTGAACCCTTGAAGGCAGCTTTGCTAATTAACTATGACCCAACTGGACCATCTCGGCTATTGTCCACCATTGCAGAGCAAGAAGGGATTAGAGCAAAGCCAATTGAAGTGAATCAATTTGTTGATTTTATCAAACGCAACAACCTCCAAAGTGAGAGCTTCTTTATCGGGCAAAACCAATATTTGGTAACTTCAATTCATGACGGCTGGTTCTGTGCAAGGTGCATGAACACATCACATCCTGCTGGTGAAGGTGCTATAGTTATGCAGACAACATCATTCATCTTGGTTGCACTGTATGATGGTTCCATTGGTTCAGCATCTCGTGCTATGGTGGATGTTGATCAGTTTGCATGGCAATTGGGCAGAAAGAACCTTTAA 444 42.57 MDWTFVRKAWDKWISTSIGSSGEPLKAALLINYDPTGPSRLLSTIAEQEGIRAKPIEVNQFVDFIKRNNLQSESFFIGQNQYLVTSIHDGWFCARCMNTSHPAGEGAIVMQTTSFILVALYDGSIGSASRAMVDVDQFAWQLGRKNL* 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17738720 17744676 + Vvi2g938 Vvi2g938 783637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g938 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Vvi2g938 147 SUPERFAMILY Profilin (actin-binding protein) 10 146 IPR036140 -
Vvi2g938 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Vvi2g938 147 Pfam Profilin 9 144 IPR005455 GO:0003779
Vvi2g938 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g938 - - vvi:104877629 301.982