Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g94 ATGAACGACGCAGATGTCTCCAAGCAGATCCAGCAGATGGTGAGATTCATCCGCCAAGAAGCGGAGGAAAAGGCGAATGAAATCTCTGTATCCGCCGAAGAAGAATTCAACATTGAGAAGTTGCAGCTTGTTGAAGCGGAGAAGAAGAAGATCAGACAGGAATATGAGCGAAAAGAGAAGCAAGTTGATATTCGGAAGAAAATTGAATACTCCATGCAGCTCAATGCCTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACTTAGTTAGCTCCATGAAAGAGGCTGCATCGAAGGAGCTCCTGCATGTGAGCCATGATCACCATGTCTATAAAAGGCTTCTGAGAGATCTTGTGGTTCAGAGTTTACTCAGATTGAAGGAACCTGCTGTCTTATTGCGTTGTCGGAAAGATGACTTGCATTTGGTGGAATCTATCTTGGATTCCGCAAAGGATGAGTATGCAGGAAAAGCAAATGTTTATCCACCTGAAATAATAGTTGACCATCAAGTCTATCTTCCACCTGCGCCTAGCCATCATCATGCCCATGGCCCCTTCTGCTCTGGAGGTGTGGTGTTGGCTTCTCGAGATGGGAAAATTGTATGTGAGAACACCCTTGATGCAAGATTGGATGTTGTATTCCGTAAAAAACTTCCAGAGATTCGCAAGTGGCTCTTTGGTCAGGTTGCTGCATGA 693 44.73 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVDIRKKIEYSMQLNASRIKVLQAQDDLVSSMKEAASKELLHVSHDHHVYKRLLRDLVVQSLLRLKEPAVLLRCRKDDLHLVESILDSAKDEYAGKANVYPPEIIVDHQVYLPPAPSHHHAHGPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKWLFGQVAA* 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 970123 974084 - Vvi2g94 Vvi2g94 782793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g94 230 Coils Coil 38 61 - -
Vvi2g94 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Vvi2g94 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi2g94 230 Gene3D - 92 229 IPR038495 -
Vvi2g94 230 Gene3D - 1 62 - -
Vvi2g94 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi2g94 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 230 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi2g94 230 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g94 K02150 - vvi:100246834 446.432