Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g970 ATGGCGTTGGTCCAACTATTCAACGGAGGATATCATGTTATCACCAAAGTTGCTCTCAACGTCGGCATCAACCAGCTCGTCTTCTGTGTCTTCCGCGACCTCATTGCGCTTTCTATTCTGGCCCCCATCGCCTATGTCCGCGAAAAAAGGATTCGACCACCTATGACTAAGCCTGTTGTCATGACATTCTTTGTACTAGGGTTAACTGGGATATTTGGGAACCAGCTTCTGTTTCTTATTGGACTTAGCTACACAAATCCAACTTATGCAGCTGCCACACAACCTGCAATTCCAGTCTTTACATTTATATTGGCTACAATAATGGGTACAGAAACAGTTAATTTACTCAGAACTGAAGGTCAGGTGAAGGTTGGAGGTACACTTGTATGTGTTTCTGGTGCCATATTAATGGTTCTGTTTCGAGGCCCAGTTTTAATCGGATATTCAGACTTTATGGAGTATGGGCTAGGACAGTGGCACCTTGGTGTGTTATGCTTAATTGGAAACTGTTTGTGCATGGCAGCTTATTTAGCCATTCAGGCTCCACTTTTGAAGAAGTATCCAGCCAGCCTTTCAGTCACAGCATATTCATACTTTTTTGGTGCTTTATTTATGGTAGTGACAGCATTCGTTATGACTAATGAGTCAACAGATTGGAGTTTGACGAAGTCTGAACTTTTCGCAGTCTGCTATGCTGGAGTAGTTGCTTCTGCCATTAACTATGGGCTCCTGACATGGTCCAATAAGATCTTGGGGCCTTCTTTGGTTGCTCTGTATAATCCACTTCAACCTGCGGCTTCTGCCTTCCTGTCAAGAATTTTCCTTGGAAGCCCTATTTATTTGGGAAGCATTCTTGGGGGATCTTTAATTATTGCTGGTCTCTATTTGGTCACTTGGGCATCCTACAGGGAAAGACAAGCTGCAATGGGGGTTATCCCTCATGCTATCAGGGCCTCTGAACCACTCATTCACAAAGATGCATCACTCACCAAGATTCCATATCAGAGGGGACATATTTTCTCTGGGCCATCCACCTCATTGCCAAAGGGCTTGGATTGA 1059 44.19 MALVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPIAYVREKRIRPPMTKPVVMTFFVLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFILATIMGTETVNLLRTEGQVKVGGTLVCVSGAILMVLFRGPVLIGYSDFMEYGLGQWHLGVLCLIGNCLCMAAYLAIQAPLLKKYPASLSVTAYSYFFGALFMVVTAFVMTNESTDWSLTKSELFAVCYAGVVASAINYGLLTWSNKILGPSLVALYNPLQPAASAFLSRIFLGSPIYLGSILGGSLIIAGLYLVTWASYRERQAAMGVIPHAIRASEPLIHKDASLTKIPYQRGHIFSGPSTSLPKGLD* 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18515320 18524865 + Vvi2g970 Vvi2g970 783669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g970 352 Pfam EamA-like transporter family 161 298 IPR000620 GO:0016020|GO:0016021
Vvi2g970 352 Pfam EamA-like transporter family 3 120 IPR000620 GO:0016020|GO:0016021
Vvi2g970 352 PANTHER WAT1-RELATED PROTEIN 2 331 IPR030184 GO:0016021|GO:0022857
Vvi2g970 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 200 303 - -
Vvi2g970 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 32 141 - -
Vvi2g970 352 PANTHER WAT1-RELATED PROTEIN 2 331 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g970 - - vvi:100263130 657.521