Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g98 ATGCCTAAATCACTTCTGAGAAAAGGAGGTGATGGGTTTTCAGGGAAGTTGCAAAAGGGTGGAATGTCACCAGAGAAAGGAATTCCAGGGAGTCAAGATGCGAATAATAGACTGATTTTCTTTGACGGCTGTAACTTTGTATTTGATTTAGAGGATTTATTGAGGGCTTCTGCTGAGGTATTGGGAAAGGGTACATTCGGCACAACTTATAAGGCAATTCTTGAGGATGCTACCACAGTTGTGGTCAAGAGGTTGAAGGAGGTTAGTGTTGGGAAGCGGGAGTTTGAGCAACAGATGGAGGTTGTTGGGAATATTAGGCATGAGAATGTGGTTGAACTAAGGGCATATTACCATTCCAAGGATGAGAAGTTAATGGTGTATGATTATTACAGTTTGGGGAGTGTTTCTACAATATTACATGGTAAAAGAGGAGGCGATAGGATGCCTTTAGATTGGGATACAAGATTGAGGATAGCCCTAGGTGCAGCAAGAGGAATTGCTCGTATCCATGCAGAGAATGGTGGGAAGTTTGTCCATGGCAACATAAAGTCCTCAAACATCTTCCTCAATGCTCGAGGATATGGGTGTGTCTCAGATCTTGGTCTAACAACAGTAATGAGCCCACTTGCTCCACCAATCTCCCGTGCTGCTGTAGTGCTGCTGGAACTCCTCACTGGCAAGTCCCCTATCCATGCCACCGGCGGTGATGAGGTTATCCACTTGGTCAGGTGGGTTCATTCTGTAGTTCGAGAAGAGTGGACAGCAGAAGTCTTTGATGTAGAGCTGATGAGGTATCCAAACATAGAGGAAGAGATGGTTGAGATGTTACAAATAGCAATGGGGTGTGTGATTCGGATGCCAGACCAAAGACCTAAAATGCCAGATGTAGTGAGACTAATAGAAAATGTCCGGCATACTGATACTGACAATCGGTCATCTTTCGAAACCCGGTCTGAAGGCTCAACACCATTGCCAACCACGGTTGGAACATATTCCTCTCCCTCACAGTGA 1011 45.1 MPKSLLRKGGDGFSGKLQKGGMSPEKGIPGSQDANNRLIFFDGCNFVFDLEDLLRASAEVLGKGTFGTTYKAILEDATTVVVKRLKEVSVGKREFEQQMEVVGNIRHENVVELRAYYHSKDEKLMVYDYYSLGSVSTILHGKRGGDRMPLDWDTRLRIALGAARGIARIHAENGGKFVHGNIKSSNIFLNARGYGCVSDLGLTTVMSPLAPPISRAAVVLLELLTGKSPIHATGGDEVIHLVRWVHSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIAMGCVIRMPDQRPKMPDVVRLIENVRHTDTDNRSSFETRSEGSTPLPTTVGTYSSPSQ* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1009739 1014911 + Vvi2g98 Vvi2g98 782797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g98 336 PANTHER PROTEIN, PUTATIVE-RELATED 14 311 - -
Vvi2g98 336 PANTHER OS05G0588300 PROTEIN 14 311 - -
Vvi2g98 336 Gene3D Transferase(Phosphotransferase) domain 1 131 212 - -
Vvi2g98 336 Gene3D Transferase(Phosphotransferase) domain 1 215 322 - -
Vvi2g98 336 MobiDBLite consensus disorder prediction 315 336 - -
Vvi2g98 336 SUPERFAMILY Protein kinase-like (PK-like) 59 305 IPR011009 -
Vvi2g98 336 MobiDBLite consensus disorder prediction 308 336 - -
Vvi2g98 336 Pfam Protein kinase domain 58 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g98 336 Gene3D Phosphorylase Kinase; domain 1 30 129 - -
Vvi2g98 336 ProSiteProfiles Protein kinase domain profile. 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g98 336 ProSitePatterns Protein kinases ATP-binding region signature. 61 92 IPR017441 GO:0005524
Vvi2g98 336 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g98 Vvi16g859 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76555 PF00069 Pkinase 3.70E-19 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g98 - - vvi:100258609 637.876