Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1014 ATGCGTATGCCATCCTTCAAACCAACCATGAAGGAATTGATCTTATTATCATATGGAAGATGTGTAACTTTGGCAAAGACACCCACACTGAAGCAGGAGTTAAGAACAAGTTCAGATCAAGAAATTACTTCTCTTCACTGTGATGCTCAAATGGAGCCTGACAGGCTAAACTCTCCAAACACATCAGCAATTATGTTTGAAGTTCTGGGTCATCAATTGCAGTTTTCTCAGGATCCCAATTCGAAGCATTTAGGAACTACGGTTTGGGATGCATCAATGGTATTTGTGAAATTTCTGGAGAGGAATTGCAGAAAGGGAAGGTTTAGCCCATCTAAATTGAAAGGAAAACGTGTTATTGAACTTGGAGCAGGTTGTGGAGTAGCTGGATTTGGCATGGCATTGCTAGGATGTGATGTAGTTTCAACAGATCAAACTGAAGTTTTGCCATTACTAATGAGAAATGTTGAACGTAATACTTCAAGGATCATGCAGATGAATCCTGGTTCAGATTCATTTGGTTCTGTCCAGGTAGCAGAGCTGGACTGGGGAAATGAAGATCATATAAAGGCAGTTAATCCACCATTTGATTTCATTATTGGCACTGATGTTGTTTATGCAGAGCATCTCTTGGACCCACTATTGAGGACAATATTTGCTTTATCAGGACCGAAAACCACAATTTTGCTGGGATATGAGATCCGTTCAACTAATGTCCATGAACAAATGCTTGACATGTGGAAGCAAAATTTTGAGGTGAAAATTATTCCTAAAGCAAAGATGGACAGGAAGTACCAACATCCGAGCATCCAGCTTTTCATTATGGGATTAAAACCCTCAGCAGAGACTCCAGAGACTTCATCCCCTCCAATCAATTGGGAAACAAATGAGATTGGAACAAGAGAAACTGAAAATAGTCAGGAGAAGAATGATGATAGTAGCAATGAAACCATTGAATCAGATGATTTTGTCAGTGACAAGGTGAAGAAAGATGGCATACTGCTGAGAGGACTTCAGAATGGGAAGCTAAATGAGTGGGAAGCAAGGAGATATGGCTCTATGGCTGCTCGTCTTCTTCGAGATGTCAAGATAACTTAA 1095 40.18 MRMPSFKPTMKELILLSYGRCVTLAKTPTLKQELRTSSDQEITSLHCDAQMEPDRLNSPNTSAIMFEVLGHQLQFSQDPNSKHLGTTVWDASMVFVKFLERNCRKGRFSPSKLKGKRVIELGAGCGVAGFGMALLGCDVVSTDQTEVLPLLMRNVERNTSRIMQMNPGSDSFGSVQVAELDWGNEDHIKAVNPPFDFIIGTDVVYAEHLLDPLLRTIFALSGPKTTILLGYEIRSTNVHEQMLDMWKQNFEVKIIPKAKMDRKYQHPSIQLFIMGLKPSAETPETSSPPINWETNEIGTRETENSQEKNDDSSNETIESDDFVSDKVKKDGILLRGLQNGKLNEWEARRYGSMAARLLRDVKIT* 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16692711 16702257 - Vvi3g1014 Vvi3g1014 784689

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1014 364 MobiDBLite consensus disorder prediction 280 299 - -
Vvi3g1014 364 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 51 300 - -
Vvi3g1014 364 MobiDBLite consensus disorder prediction 280 321 - -
Vvi3g1014 364 Pfam Lysine methyltransferase 71 239 IPR019410 -
Vvi3g1014 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 239 IPR029063 -
Vvi3g1014 364 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 51 300 IPR019410 -
Vvi3g1014 364 CDD AdoMet_MTases 117 233 - -
Vvi3g1014 364 Gene3D Vaccinia Virus protein VP39 61 280 IPR029063 -
Vvi3g1014 364 MobiDBLite consensus disorder prediction 300 321 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1014 K21806 VCPKMT, METTL21D; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] - vvi:100246881 621.698
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g1014 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone1ag0487 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .