Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1040 ATGGCAAGGATCTTTGGAGGAAGTGAAGGTGAAACTAACACCGCTACAATAGTTGGAATACATGGATATATGGCTCCAAACTATGTTATGGAAGGGCTATATTCAATTAAGTCTGATGTTTTTGGCTTCAGAGTTCTCTTGCTTAAGATCATGACTGAGAGAAGGAATGCTGGTTTCCATCTCTCCAAGCGCGCTCCTAGCCTCCTATCATATGCATGGCAACTATGGAATGAAGGAAAGGGGTTGGAGTTGATGGATCCATTATTGACTGAATCATGCTGCCCGGATGAATTTTTGAGATGCTACCATATTGGATTACTATGTGCTCAAGAAGATGCATTTGACAGGCCAACCATGTCATCTGTAGTTGTCATGTTGAAAAGTGAAACTGTGACCCTTCGCCAGCCTGAAGGACCTGCCTTCTCCATTGGGAGATTCACCGACTGCGATGAAAAAATGTCTGTGGTTGTCTGTCAATGGTTTGACAATTTCAAATATCGGGCCTTGCTGATGGAGCTGGTGAACAAGTACACAATTTCATCATATTGTGGACCGATATACACTAATATTGCTATCTGTAGTCAAATCCTTGTTGTCTTGTATAATTCAGAAAAGATCACTTTCATGAATACATTTGATCTCAGTTCCAGTTTCTAA 657 41.1 MARIFGGSEGETNTATIVGIHGYMAPNYVMEGLYSIKSDVFGFRVLLLKIMTERRNAGFHLSKRAPSLLSYAWQLWNEGKGLELMDPLLTESCCPDEFLRCYHIGLLCAQEDAFDRPTMSSVVVMLKSETVTLRQPEGPAFSIGRFTDCDEKMSVVVCQWFDNFKYRALLMELVNKYTISSYCGPIYTNIAICSQILVVLYNSEKITFMNTFDLSSSF* 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17521527 17523801 + Vvi3g1040 Vvi3g1040 784715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1040 218 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 156 - -
Vvi3g1040 218 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Vvi3g1040 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 156 - -
Vvi3g1040 218 SUPERFAMILY Protein kinase-like (PK-like) 2 126 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g1040 Vvi7g810 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76557 None None None None Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1040 - - vvi:109121465 274.633