Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi3g1068 | ATGGCTACATGTGTGTTGTTGCAGCATTTTCATGTGAGTGATAGCTGTTTCTCAAGAACCCCTTATTTGCAGTCTTCTAGAACTTCTCAGCTTTCGAAGCTCAGGCCTGGTGGGTCTTCAATCAGATGCCAATCCACTAGCACGGATAAACAGAAATCAAGAAATCTATTGGACAATGCGAGCAACCTCCTAACCAATTTTTTAAGTGGGGGAAGTATAGGGTCAATGCCTGTAGCTGAAGGTGCAGTTTCTGATCTTTTTGGTCGGCCTCTCTTCTTTTCACTGTATGATTGGTTCATAGAGCATGGCTCAGTGTATAAACTTGCTTTTGGGCCAAAGGCATTTGTTGTTGTGTCAGATCCCATTGTTGCAAGGCATATTCTTCGAGAAAATATCTTTGGTTATGACAAGGGAGTTCTTGCTGATATACTAGAACCAATAATGGGGAAAGGACTCATACCTGCTGACCTTGACACCTGGAAGCAAAGGAGAAGAGTTATTGCTCCTGGGTTCCATGCTTTATACTTGGAAGCTATGACAAAAGTATTTACTGAGTGTTCAGAAAGAGCAATATTGAAATTTGAGAAGCTTCTAGAAGGAGAGCACTTGCATGGGGGAAAGACAATTGAGTTGGATCTTGAAGCTGAGTTTTCAAATTTGGCACTTGACATTATTGGGCTTGGTGTCTTTAACTATGATTTTGGATCTGTCACGAAAGAATCTCCAGTGATAAAGGCAGTATATGGTACTCTTTTTGAAGCTGAGCATAGATCGACCTTCTACATCCCTTATTGGAAAGTTCCTTTGGCAAGATGGATAGTACCAAGGCAGCGAAAGTTCCACAGTGACCTAAAGGTTATTAATGACTGTCTTGATGGACTCATCAAAAATGCAAAAGAGACTAGACAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACCAAAATCTTAAGGATGCAAGTCTTTTGCGGTTTTTAGTTGATATGCGAGGAGCTGATGTGGACGACCGTCAGCTAAGAGATGACCTGATGACAATGCTTATCGCTGGCCATGAAACAACTGCTGCTGTTCTCACTTGGGCTGTTTTCCTACTCGCACAAAATCCCTCCAAGATGAAAAAAGCTCAAGCTGAGATTGATTCAGTTCTTGGTCAGGGCAGAATATCCTTTGAATCACTAAAAAAATTGGAGTACATAAGACTCATTGTTGCAGAGTCTCTCCGTTTGTATCCTCAGCCCCCATTACTGATCAGACGTTCCCTCAAGTCAGATGCATTACCAGGTGGATACAAGGGTAAAAAGGACGGCCACTCAATTCCTGCTGGGACTGATATCTTTCTTTCAGTATATAACCTCCATCGGTCCCCATACTTCTGGGATCGCCCCCATGAATTTGAACCAGAGAGGTTCCTAGTACCAAGGAACAGCGACATTGAAGGATGGTCCGGCTTTGATCCATCACGGAGCCCTGGAGCGTTGTACCCCAATGAGATTGTTGCAGACTTCGCCTTCTTACCCTTTGGTGGAGGGCCGAGAAAATGTGTGGGAGACCAATTTGCACTCATGGAGTCGACCATTGCATTGACCATGTTGCTGCAGAAATTTGATGTTGAGCTGAAAGGAGGTCCAGAATCTGTGGAGTTGGTCACAGGAGCAACAATCCATACCAAGAATGGCCTTTGGTGCAGGATGATGAAGAGGTCTGATCTTCATTAG | 1719 | 43.69 | MATCVLLQHFHVSDSCFSRTPYLQSSRTSQLSKLRPGGSSIRCQSTSTDKQKSRNLLDNASNLLTNFLSGGSIGSMPVAEGAVSDLFGRPLFFSLYDWFIEHGSVYKLAFGPKAFVVVSDPIVARHILRENIFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTECSERAILKFEKLLEGEHLHGGKTIELDLEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIKNAKETRQETDVEKLQQRDYQNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDSVLGQGRISFESLKKLEYIRLIVAESLRLYPQPPLLIRRSLKSDALPGGYKGKKDGHSIPAGTDIFLSVYNLHRSPYFWDRPHEFEPERFLVPRNSDIEGWSGFDPSRSPGALYPNEIVADFAFLPFGGGPRKCVGDQFALMESTIALTMLLQKFDVELKGGPESVELVTGATIHTKNGLWCRMMKRSDLH* | 573 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 18343141 | 18371399 | - | Vvi3g1068 | Vvi3g1068 | 784743 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi3g1068 | 572 | SUPERFAMILY | Cytochrome P450 | 87 | 568 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | P450 superfamily signature | 350 | 367 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | P450 superfamily signature | 402 | 413 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | P450 superfamily signature | 506 | 515 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | P450 superfamily signature | 515 | 526 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | E-class P450 group I signature | 99 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | E-class P450 group I signature | 339 | 356 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | E-class P450 group I signature | 359 | 385 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | E-class P450 group I signature | 505 | 515 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PRINTS | E-class P450 group I signature | 515 | 538 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PANTHER | CYTOCHROME P450 FAMILY 4 | 71 | 568 | - | - | |
Vvi3g1068 | 572 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 508 | 517 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi3g1068 | 572 | Gene3D | Cytochrome P450 | 77 | 572 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g1068 | 572 | PANTHER | CYTOCHROME P450 97B3, CHLOROPLASTIC | 71 | 568 | - | - | |
Vvi3g1068 | 572 | Pfam | Cytochrome P450 | 99 | 563 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi3g1068 | K24543 | - | vvi:100248381 | 1153.27 |