Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1071 ATGAAAATATTCCCTGAAAAACTCTATGAAAAATTCTCTGGAAAATTGGTATATAAGTATAGAGAGGGATATTTATTGCTGATAATCTATCACTTGTTTGATCAGTTTAAGGCTCATATCGATAATCTCAAGGAGGAAAAGAAGAGGGAAACAACTGATGAAGTAGTCTTTCCTTGTGTTCTTAAGATTCAACCCAAGGGCTCTTTCAACAATAAGGATCCAATTATCTTGGGAGTTGATGTTCTTGAAGGGATTGTGAAGGTGGGAACTCCAATTTGTATTCCTCATAGGGATTTTATTGATATTGGCCACATTGCGTCCATTCAGAAAAACCGGAGTCCAGTTGATATTGCCAGGAAAGGCCAAGAGGTGGCCATTATGATAGTTGGCACGAATCCGGAAGAGAAGCAAAAGATGCATGGCAGACATTTTGGGGATGAAGATGAGCTTGTCAACCGTATTAGCAGAAAGTCGATTGATGTGCATAAAGCTAATTACCAAGATGATCTATCTCTTGAAGAGTGGAAGTTGGTTGTGAAACTAAAGAGCCTCTTCAAGATACAATGA 567 38.45 MKIFPEKLYEKFSGKLVYKYREGYLLLIIYHLFDQFKAHIDNLKEEKKRETTDEVVFPCVLKIQPKGSFNNKDPIILGVDVLEGIVKVGTPICIPHRDFIDIGHIASIQKNRSPVDIARKGQEVAIMIVGTNPEEKQKMHGRHFGDEDELVNRISRKSIDVHKANYQDDLSLEEWKLVVKLKSLFKIQ* 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18414316 18417667 + Vvi3g1071 Vvi3g1071 784746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1071 188 Coils Coil 33 53 - -
Vvi3g1071 188 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 28 188 IPR015760 -
Vvi3g1071 188 PANTHER PHOTOSYSTEM II PROTEIN D1 28 188 - -
Vvi3g1071 188 SUPERFAMILY Translation proteins 55 187 IPR009000 -
Vvi3g1071 188 Gene3D Translation factors 51 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1071 K03243 - vvi:104878966 325.865