Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g14 ATGGGGGACGGCGGTGGTGGTCGCGGCGGTTGCTGTCCACCGATGGATTTGTTCCGGTCGGAGCCGATGCAACTTGTTCAACTCATCATTCCTATTGAGTCCGCTCACCACACCATCTCCTACCTTGGAGACCTCGGTCTCATCCAATTCAAAGACCTGAATGTGGAGAAGAGCCCATTTCAGCGCACTTATGCTGCTCAGATAAAAAAATGTGCAGAGATGGCACGGAAGTTACGTTTTTTCAAGGAGCAAATGTCTAAAGCTGGATTATCACCTTCAGCAAAGATTATGATGCGGGGTGATATTGATATGGATGACTTAGAGGTAAAACTTGGAGAGCTTGAAGCAGAGCTGGTTGAAATAAATGCAAATGGCGAAAAGTTGCAACGTGCTTATAGTGAGCTTGCAGAGTATAAGCTTGTTCTGCACAAGGCTGGTGAGTTTTTTTATTCCATTCGAAGCAGTGCTACAGCTCAGCAGAGAGAAATTGAAGCACATTCTATTAGTGAAGAATCAGTAGACACTCCTTTACTACTGGAGCAAGAAATGTCAACTGATCTGTCAAAGCAAGTAAAGTTGGGGTTTCTTGCTGGCCTTGTTCCTAGGGTGAAATCTATGGCATTTGAAAGGATTCTATTTCGTGCTACCAGGGGTAATGTGTTTCTGCGGCAATCTGCTGTTGAAGATCCTGTGACTGATCCTGTTTCAGGAGAGAAGATCGAGAAAAATGTATTTGTGGTTTTCTACTCTGGAGAAAAAGTGAAGAACAAAATTCTTAAGATATGTGAAGCTTTTGGAGCAAATCGCTACTCTTTTCCTGAAGACCTTGGAAAACAAGCTCAAATGATCACTGAGGTTTCAGGAAGACTGTCAGAGCTAAAGACCACAATAGATGTTGGACTGTTGCACCGTGGCAATTTGTTACAGACCATAGGCGATCAATTTGAGCAGTGGAACCTTTTGGTGAGGAAGGAGAAATCCATCTACCATACTCTAAACATGCTTAGCATTGATGTAACGAAAAAATGTCTTGTAGCAGAGGGGTGGAGTCCCACTTTTGCAACAAAACAGATTCAGGATGCATTGCAGCGGGCAACATTTGACTCCAACTCACAAGTTGGAGCCATTTTCCAGGTTTTGCATACGATAGAGTCGCCACCAACTTATTTCCGCACAAACAAATTTACTTCTGCTTTTCAGGAAATTGTTGATGCATATGGGGTGGCCAAGTATCAAGAGGCAAATCCTGGTGTATTCACTATTGTTACATTTCCATTTCTTTTTGCTGTCATGTTTGGTGATTGGGGACATGGATTATGCTTGTTACTCGCTACATTGTTTTTTATAATCAGGGAAAAGAAACTCTCCAATCAGAAGCTCGGAGACATCACAGAAATGACCTTTGGTGGCCGTTATGTTATACTGATGATGGCACTCTTCTCAATTTATACTGGTTTGATTTATAATGAGTTCTTCTCAGTCCCGTTTGAACTATTTGGTCCCTCGGCCTATGCATGCCGTGATCTTTCTTGCAGGGATGCTTCAACAGCGGGCTTAATTAAGGTGCGTCGCACTTACCCATTTGGTGTGGACCCTGTATGGCATGGTTCCCGCAGCGAACTGCCATTCCTCAACTCTTTGAAGATGAAAATGTCAATCCTTATAGGGGTGGCCCAAATGAATCTTGGAATCATATTGAGCTATTTCAATGCCAAATTCTTTCAGAATAGCCTAAATATATGGTTCCAATTTGTTCCCCAGATGATATTTTTAAACAGTTTGTTTGGTTACCTTTCTGTCCTCATCATTGTGAAATGGTGCACTGGTTCACAAGCTGATTTATATCACATAATGATATACATGTTCTTGAGTCCCACTGATGATCTGGGAGAAAACCAGCTTTTCATTGGTCAGAAAACTGGTCAGATCGTGCTATTATTGCTGGCTCTTGTTGCTGTACCATGGATGCTGCTTCCAAAGCCTTTTCTTATGAAGAAGCAACATGAAGAAAGGCACCAAAGCCAGCTGTACGTACCACTTCAGAGCACAGAGGATTCCTTCCAGTTGGATACAAGTCATGATTCCCATGATCATGAAGAATTTGAATTCGGTGAAGTTTTTGTACATCAACTTATACATACGATTGAATTTGTACTTGGAGCAGTCTCCAATACCGCATCATACCTTCGATTATGGGCCCTCAGTCTTGCTCACTCAGAGTTATCAAGTGTATTCTATGAGAAGGTCCTCCTCCTGGCTTGGGGGTTCAACAATGTAATAATCCTTATAGTTGGCATCATCGTGTTCATTTGCGCCACTATCGGTGTGTTGCTTGTGATGGAAACTCTGAGTGCATTCTTACATGCGTTGCGACTTCACTGGGTGGAGTTCCAGAACAAGTTCTACGAGGGAGATGGTTATAAGTTTTGTCCTTTCTCATTCGCATTGCTCAGTGAGGAAGATGATTGA 2469 42.61 MGDGGGGRGGCCPPMDLFRSEPMQLVQLIIPIESAHHTISYLGDLGLIQFKDLNVEKSPFQRTYAAQIKKCAEMARKLRFFKEQMSKAGLSPSAKIMMRGDIDMDDLEVKLGELEAELVEINANGEKLQRAYSELAEYKLVLHKAGEFFYSIRSSATAQQREIEAHSISEESVDTPLLLEQEMSTDLSKQVKLGFLAGLVPRVKSMAFERILFRATRGNVFLRQSAVEDPVTDPVSGEKIEKNVFVVFYSGEKVKNKILKICEAFGANRYSFPEDLGKQAQMITEVSGRLSELKTTIDVGLLHRGNLLQTIGDQFEQWNLLVRKEKSIYHTLNMLSIDVTKKCLVAEGWSPTFATKQIQDALQRATFDSNSQVGAIFQVLHTIESPPTYFRTNKFTSAFQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGLCLLLATLFFIIREKKLSNQKLGDITEMTFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGPSAYACRDLSCRDASTAGLIKVRRTYPFGVDPVWHGSRSELPFLNSLKMKMSILIGVAQMNLGIILSYFNAKFFQNSLNIWFQFVPQMIFLNSLFGYLSVLIIVKWCTGSQADLYHIMIYMFLSPTDDLGENQLFIGQKTGQIVLLLLALVAVPWMLLPKPFLMKKQHEERHQSQLYVPLQSTEDSFQLDTSHDSHDHEEFEFGEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVIILIVGIIVFICATIGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFCPFSFALLSEEDD* 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 260947 276256 - Vvi3g14 Vvi3g14 783689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g14 822 PIRSF ATP6V0A1 13 822 IPR026028 GO:0000220|GO:0046961
Vvi3g14 822 PANTHER VACUOLAR PROTON ATPASES 9 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vvi3g14 822 Coils Coil 104 131 - -
Vvi3g14 822 Pfam V-type ATPase 116kDa subunit family 41 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vvi3g14 822 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 9 822 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g14 Vvi18g1033 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g14 K02154 - vvi:100258865 1596.64