Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g141 ATGGGCTTCCACCTATCTCCAGCGTCCTCCTCCAGAAAATGGCTGGGGTTTGTGACGGCCGTTTGGGTTCAGTCCATCTCCGGCAACAACTACACTTTTTCCAACTACTCAGATGCTCTCAAATCGTTAATGGCTCTCACCCAGTTGCAACTCAACAACCTCTCTGTTGCCAAGGATGTGGGCAAGGCGTTTGGCCTCCTCTCCGGTCTCGCCTCCGACCGGTTGTCCACTCCGATGATGCTTCTTATTGGGTCGATTGAAGGGCTTGTCGGGTATGGGGTTCAATGGCTGGTCGTCAGCCGGAAAATCCAGCCGCTTCCCTATTGGCAGATGTGTATATTTCTATGCATGGGAGGCAACAGTACGACATGGATGAACACGGCGGTTCTGGTGACATGCATCCGAAACTTCCGGACGAATCGAGGTCCGGTCTCCGGAATATTGAAGGGTTACGTGGGTCTGAGCACCGCCATTTTCACTGACCTCTGCACTGCTCTCTTTGCCGACGACCCCGCCATCTTCCTCCTCATGCTCGCCATCATCCCCCTTCTTGTCTGCCTCTCCGCTATTCTCTTCCTCCGCGAGGTCCCTTCGTCGTCCACCGCAGCCGGCGAGAAGGAAGAGACCAAATTCTTCAACCTCTTCAACATCGTCGCCGTCGTCCTCGCCGTCTATCTCCTCACCTTCGACGTCACCGGCTCCCATAGCCGCATCCTCTCTCAGGCATTCGCCGTCGTCCTGCTCTTCCTCCTGGCTTGCCCTCTCTCAATCCCTCTCTATTTCATGCTACAGGATTTTAACCGGTCCGGTTCAAAACCCAGTTCCGACATCGAGGGTCTAATCACCGAAACCCTCCTGAGTCAAAACAGTCAGCCGGAAATGGCGGCTCCGGCATCGGAGGAAAAGGTGGAGCCTGTGGTGGAAATCAAACGACCCCGGCCGTCAATTGGGGAGGATCACACAATTATTGAAGCAATCAGCACCACTGATTTCTGGATACTCTTTGCATCCTTCCTCTGTGGAGTTGGCACTGGTTTGGCTGTTATGAATAACATGGGACAAATGGGTCTAGCTCTCGGCTACGTGGATGTCTCCATTTTCGTCTCCCTCACAAGCATTTGGGGATTTTTCGGCCGAATTTTATCCGGTTCAGTTTCAGAATACTTCATAGGAAAAGCTGGAACACCAAGACCTTTCTGGAATGCAGCTTCTCAGATTCTGATGGCAGTTGGGTATGTTGTGATGGCCATGGCTTTGCCTGGCTCACTATACATTGGTTCAGTCGTGGTAGGGATTTGCTATGGAGTTCGTCTCGCTGTCACAGTCCCCATTGCTTCTGAACTGTTTGGCCTGAAATATTATGGTCTCATCTACAACATTCTAATCCTCAACCTCCCCCTTGGCTCCTTCCTCTTCTCCGGCCTGCTTGCTGGCTTGTTGTATGACGCCCATGCTACCCGCACAGCAGGAGGTGGCACCACATGCATAGGCCCCCACTGTTACAGGCTGGTGTTCGTGGTAATGGCCTTATCATGCATTATCGGGTTTGGCTTAGACGTCCTACTGGCAATTAGAACAAAGAATGTTTACTCCAAGATTCGCGCGAGCAAGAGATCAAAGAAGCCAGCGGCCCCATCCAACAGCCGATAA 1650 52.42 MGFHLSPASSSRKWLGFVTAVWVQSISGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLSTPMMLLIGSIEGLVGYGVQWLVVSRKIQPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRTNRGPVSGILKGYVGLSTAIFTDLCTALFADDPAIFLLMLAIIPLLVCLSAILFLREVPSSSTAAGEKEETKFFNLFNIVAVVLAVYLLTFDVTGSHSRILSQAFAVVLLFLLACPLSIPLYFMLQDFNRSGSKPSSDIEGLITETLLSQNSQPEMAAPASEEKVEPVVEIKRPRPSIGEDHTIIEAISTTDFWILFASFLCGVGTGLAVMNNMGQMGLALGYVDVSIFVSLTSIWGFFGRILSGSVSEYFIGKAGTPRPFWNAASQILMAVGYVVMAMALPGSLYIGSVVVGICYGVRLAVTVPIASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGLLYDAHATRTAGGGTTCIGPHCYRLVFVVMALSCIIGFGLDVLLAIRTKNVYSKIRASKRSKKPAAPSNSR* 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1502132 1506352 - Vvi3g141 Vvi3g141 783816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g141 549 Gene3D MFS general substrate transporter like domains 10 206 IPR036259 -
Vvi3g141 549 Pfam Nodulin-like 13 258 IPR010658 -
Vvi3g141 549 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 5 541 - -
Vvi3g141 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 541 - -
Vvi3g141 549 SUPERFAMILY MFS general substrate transporter 63 529 IPR036259 -
Vvi3g141 549 CDD MFS_Mch1p_like 13 515 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g141 - - vvi:100260696 1029.24