Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g145 ATGGTCCACACATCCAACGGTCGTCATCATATAAAAAAAATGAGGTCCCATTTTAACACCGTAGTCCCTGCCCCACCGACACAAAATCTATTACATAAAACTTCACTGCCCAGGTTTGTCTCTGCTTCAAACTCAACTCCTTTCATGGCGCCTCCTTTCTTACTCGTCTTCTTTTTTTTCTTCTTCTCTGGGGTTCCGCTGAATGCGGCATCGTTTTCGCATGATCAGGCGGTGAAGACCTATATCTTTCGGGTGGATGGCGATTCTAAGCCGTCCATTTTTCCTACACACTACCACTGGTATAGCTCGGAGTTTGCTGACCCGGTTCAAATCCTCCATGTATACGACGTCGTTTTTCATGGCTTCTCTGCTACTCTCACCCCAGACAGAGCCGCTTCGATTCTTCAGAACCCCTCGGTTCTGGCGGTGTTCGAGGATCGCCGCCGTGAGCTGCACACCACTCGGTCGCCGCAGTTTCTTGGCCTGAGGAACCAGCGGGGGCTTTGGTCGGAGTCCGACTATGGCTCTGATGTTATTGTGGGAGTGTTTGATACTGGAGTGTGGCCGGAGCGGCGGAGCTTCTCGGATCTGAATCTCGGGCCGGTGCCGGCGAAGTGGAAGGGGATATGCGAGACTGGAGTGAGGTTCGCGAGGACGAATTGTAACCGGAAGCTCGTCGGAGCTAGGTCGCCGAGAGATGCTGATGGGCACGGAACTCACACTGCGTCGACTGCTGCTGGGAGATATGCTTTCAAGGCGAGCATGTCTGGCTATGCCGCCGGGATTGCGAAAGGCGTTGCTCCGAAAGCTCGACTGGCTGTTTACAAAGTGTGCTGGAAAAACTCCGGTTGTTTCGATTCCGACATCCTGGCGGCATTTGATGCTGCTGTTGCTGATGGTGTCGACGTGATTTCGATCTCGATCGGAGGTGGCGACGGAATTTCTTCTCCGTATTACCTTGATCCGATTGCAATTGGTTCTTTCGGAGCAGTATCGAAGGGCGTTTTCGTTTCAGCATCTGCTGGAAACGATGGACCAAACGGAATGTCAGTTACAAACCTTGCGCCTTGGCAAACGTCGGTCGGAGCTGGCACCATTGATCGTAATTTCCCAGCGGATGTGGTTCTTGGTAACGGAAAGAGACTCTCAGGAGTGTCGCTTTACTCTGGAGAGCCACTGAAAGGGAAACTGTATTCTCTGGTTTACCCTGGAAAATCTGGGATTCTCGCTGCCTCACTGTGTATGGAGAATTCGCTTGATCCAACAATGGTGAAAGGAAAGATTGTGGTTTGCGATCGTGGAAGCAGTCCTAGGGTTGCTAAAGGTCTGGTAGTGAGGAAAGCTGGCGGCATCGGAATGATTCTCGCTAATGGGATCTCCAATGGCGAAGGCTTAGTCGGCGATGCTCATCTCATTCCAGCTTGCGCTGTTGGCTCCGACGAGGGCGACGCCTTGAAGTCCTACATTTCATCGACCTCAAAACCTACCGCAACCATCGATTTCAAAGGAACTGTGATAGGAATCAAGCCAGCACCGGTAGTGGCCTCCTTCTCCGGCCGAGGACCAAACGGACTCAACCCCGAAATTCTCAAGCCTGATCTCATAGCACCTGGTGTGAACATCCTCGCCGCGTGGACCGACGCCGTCGGCCCCACCGGACTCGACTCAGATACTCGGAAAACAGAATTCAACATTCTCTCTGGCACATCGATGGCTTGCCCTCACGTCAGCGGCGCAGCGGCGCTCCTGAAATCTGCACATCCCGATTGGAGTCCAGCCGCGATAAGGTCCGCGATGATGACCACTGCTAGCATCACCGACAACCGTCTCCAGCCCATGATTGACGAAGCCACCGGAAAACCATCCACGCCATACGATTTCGGCGCCGGGAACCTCAACCTCGACCAAGCAATGGACCCAGGCCTAGTCTACGATATCACAAACGCCGATTACGTCAACTTCCTATGTTCAATTGGTTACAACCCCAAGATCATTCAGGTGATTACTCGATCACCGGAAACCTGTCCGTCGAAGAAACCCCTGCCAGAGAATCTCAACTACCCATCAATATCAGCATTGTTCCCCGCCACATCCGTGGGAGTTTCAACCAAATCCTTTATCCGAACGTTGACAAATGTGGGGCCGCCGAATTCAGTATACAGAGTGAAAATCGAAACTCCGCCAAAGGGAGTGACGGTGGCTGTGAAGCCAGCGAAGCTGGTGTTCTCGGAAAAGATGAAGAAACAGAGCTTTGTAGTGACCGTATCCGCCGACAGCCGAAAAATAGAAATGGGCGAATCGGGTGCGGTATTCGGATCACTGTCGTGGTCTGATGGAAAGCACGTGGTTCGGAGCCCCATAGTGGTAACTCAAATAGAGCCGTTGTAA 2388 52.47 MVHTSNGRHHIKKMRSHFNTVVPAPPTQNLLHKTSLPRFVSASNSTPFMAPPFLLVFFFFFFSGVPLNAASFSHDQAVKTYIFRVDGDSKPSIFPTHYHWYSSEFADPVQILHVYDVVFHGFSATLTPDRAASILQNPSVLAVFEDRRRELHTTRSPQFLGLRNQRGLWSESDYGSDVIVGVFDTGVWPERRSFSDLNLGPVPAKWKGICETGVRFARTNCNRKLVGARSPRDADGHGTHTASTAAGRYAFKASMSGYAAGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVADGVDVISISIGGGDGISSPYYLDPIAIGSFGAVSKGVFVSASAGNDGPNGMSVTNLAPWQTSVGAGTIDRNFPADVVLGNGKRLSGVSLYSGEPLKGKLYSLVYPGKSGILAASLCMENSLDPTMVKGKIVVCDRGSSPRVAKGLVVRKAGGIGMILANGISNGEGLVGDAHLIPACAVGSDEGDALKSYISSTSKPTATIDFKGTVIGIKPAPVVASFSGRGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDSDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASITDNRLQPMIDEATGKPSTPYDFGAGNLNLDQAMDPGLVYDITNADYVNFLCSIGYNPKIIQVITRSPETCPSKKPLPENLNYPSISALFPATSVGVSTKSFIRTLTNVGPPNSVYRVKIETPPKGVTVAVKPAKLVFSEKMKKQSFVVTVSADSRKIEMGESGAVFGSLSWSDGKHVVRSPIVVTQIEPL* 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1534986 1538249 + Vvi3g145 Vvi3g145 783820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g145 795 Gene3D Peptidase S8/S53 domain 177 651 IPR036852 GO:0004252|GO:0006508
Vvi3g145 795 PRINTS Subtilisin serine protease family (S8) signature 175 194 IPR015500 -
Vvi3g145 795 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Vvi3g145 795 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Vvi3g145 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 67 152 IPR037045 -
Vvi3g145 795 ProSiteProfiles Serine proteases, subtilase domain profile. 148 638 - -
Vvi3g145 795 Pfam Subtilase family 175 617 IPR000209 GO:0006508|GO:0008236
Vvi3g145 795 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 68 790 - -
Vvi3g145 795 Gene3D - 367 506 - -
Vvi3g145 795 Gene3D - 655 792 - -
Vvi3g145 795 CDD PA_subtilisin_like 373 499 - -
Vvi3g145 795 SUPERFAMILY PA domain 421 494 IPR046450 -
Vvi3g145 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Vvi3g145 795 Pfam PA domain 399 485 IPR003137 -
Vvi3g145 795 CDD Peptidases_S8_3 150 604 IPR034197 -
Vvi3g145 795 Pfam Fibronectin type-III domain 684 789 IPR041469 -
Vvi3g145 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 790 IPR045051 -
Vvi3g145 795 SUPERFAMILY Subtilisin-like 151 642 IPR036852 GO:0004252|GO:0006508
Vvi3g145 795 Pfam Peptidase inhibitor I9 81 152 IPR010259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g145 - - vvi:100854771 1448.34