Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g157 ATGTCCAATCACCAGGAGGATCTTGATCTCCTTCTCTCTCTCGAAGATAGGGTTTTGGAAACTCCTCCCCACTCACCAGGATACCTTTCTGATGATGGATCTCCAACGCGAACAAGGCAGTCAGACATGTCTGTCTTCAGAAATGCCGTCCAAGATTGTCTTGATTTTGAGCCTGAATCTGTGAAGAAAGCTCCCAATTTGAAGAAGAATGAGACTGACGTTGAGAAGTTTTCAGGTTTGCGTATAAGGAATCAACTGGTCTCCTCTGTTGAGCTTAGCAGCCAATTTTCAGATATTCGATTTGTTCGGCTATCAGCAATAAAGAATTTGCTGGTGGGGGACACCCTTTCAGGTTGTTGGGCGACCGTTGGTGTTTTGACTGAGAAGGGGAACCCAAAGACTAGTTCTGCGGGGAAGAACTATTGCATATGGAAAATTGGGTGCTTGGATGAAGACACTGTTAGTGTTTTCTTGTTTGGTGATGCTTATCAGAAGAACTGGAAAGAGCAGGCTGGAACAGTCTTTGCATTATTCAATTGCAGTGTTAGGAAGGATGCCATGGGAAATGGGTTTTCATTAAGTGTCTATTCTCCTGGTCAAATTTTAAAGTTGGGCACTTCAGTTGATTATGGAGTTTGCAAGGGAAAAAGGAAGGATGGGATGGCTTGTACACTAGTCATAAACAAGCGTCGTGGGGTGTATTGTAGATACCATAAATCGAAAGCATCTGAGAAATATTCCATAATGCGAACTGAGCTCAAAGGAGGGAACTTAAAGACAGCCTTTCGGGATCCTCTCAACTCAAAAGGAGTTTACTTAGTTGACCCCCTAGCTGATAAAACCAATGTAAAAAGGCCCATGCAGCCACTAAAGTTGTTATCAGTGGATGGACTGAAGAAGGCACTTAGCAATGCAGGTAAAGTGACAACAAATGCACACTCTCAAGGAATAAGGTTTCTAACTGAAATCACAGGTTTGGGGTCCTTTCCACCTCTGCTCATTTGCTGTGATCCTATTTGA 1020 43.24 MSNHQEDLDLLLSLEDRVLETPPHSPGYLSDDGSPTRTRQSDMSVFRNAVQDCLDFEPESVKKAPNLKKNETDVEKFSGLRIRNQLVSSVELSSQFSDIRFVRLSAIKNLLVGDTLSGCWATVGVLTEKGNPKTSSAGKNYCIWKIGCLDEDTVSVFLFGDAYQKNWKEQAGTVFALFNCSVRKDAMGNGFSLSVYSPGQILKLGTSVDYGVCKGKRKDGMACTLVINKRRGVYCRYHKSKASEKYSIMRTELKGGNLKTAFRDPLNSKGVYLVDPLADKTNVKRPMQPLKLLSVDGLKKALSNAGKVTTNAHSQGIRFLTEITGLGSFPPLLICCDPI* 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1647089 1650863 + Vvi3g157 Vvi3g157 783832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g157 339 Gene3D - 65 239 IPR012340 -
Vvi3g157 339 PANTHER PROTEIN MCM10 HOMOLOG 34 322 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vvi3g157 339 MobiDBLite consensus disorder prediction 21 40 - -
Vvi3g157 339 Pfam Primase zinc finger 205 248 IPR015408 GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g157 K10736 - vvi:100250259 645.58