Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi3g29 | ATGTTGATGATGAATCAACTGACCCACCGGGGACTAGCCAATCTCAGCAAGGTGTACGGTGGCCTGCTGCATATGAAGATGGGAGTCTTGCACTTAGTGGTCGTGTCCACCCCGGAGATGGCTCGTGAAGTTCTCCAGGTGCAGGACAGTGTTTTCGCCAACCGGCCAGCCAGGGTTGCGATAAAATATCTGACATATGATAGAGCGGACATGGCCTTCGCTCAATACGGACCCTCTTGGAGGCAGATGAGGAAGATTTGTGTGATGAAGCTCTTCAGTCGAAAACGGGCTGAGTCTTGGGCGTCGGTGAGGGAGGAGGTGGATTCAACGCTTCAAAGTATCGCCAAGAGAGGTGGGTCTGCTGTTAATATTGGTGAATTGGCGTTGGACCTCACCAAGAATATAACGTACAGGGCTGCGTTCGGGTCGAGTTCGCGAGAAAAACAGGAGGAGTTCGTGAAGATTTTGCAGGAGTTCTCGAGGCTTTTTGGGGCTTTCAACTTTGCAGATTTTATACCCTGGCTGGGTTGGATTCAAGGGAAGGAGTTCAATAAGCGGCTGGTCAAGGCTCGAGGATCACTTGATGAGTTCATCGATAAAATCATCGACGATCACATTGAAAAGAGGAAGAAGCAGAATAACAGCGGAGATGAAAGTGAAAGTGAAGCAGAGTTGGACATGGTGGACGAGTTAATGGAGTTTTACAGCGAAGATGTTGCAGCGGAAGACTTGAATTCTTCAATAAAGTTCACAAGGGATAACATCAAAGCTATCATTATGGACGTGATGTTTGGTGGAACAGAAACTGTGGCATCGGCAATCGAGTGGGCAATGGCGGAGCTCATGAAAAGCCCAGATGATCTGAAGAAACTGCAGCAAGAATTAACAGATGTGGTGGGCTTGAACCGAAGGTTACACGAGTCCGATCTGGAGAAGCTCACCTACCTCAAGTGCTGCATCAAGGAAACCCTCCGGCTCCACCCTCCAATCCCAGTTCTCCTCCACGAGACCTCCGAGGCTAGTGTGGTGGCCGGATACTCAGTCCCAGCACGCTCAGATGTCATGATCAACGCCTGGGCTATAAACCGAGACAAGACCGCCTGGGAGGATCCGGAGACGTTCAAGCCAGAGAGGTTTCTGAAGAAGGACGCACCTGATTTCAAAGGGAGCCACTTTGAGTTCATTCCATTCGGGTCCGGCCGGCGGTCGTGCCCGGGTATGCAGCTTGGGCTGTATGGATTGGATCTGGCTGTGGCTCACCTTGTTCATTGTTTTAGCTGGGAACTGCCTGATGGAATGAAGGCTAGTGATCTGGATATGAGCGATCTGTTTGGACTCACTGCTCCGAGGGCGATACAGCTGGTCGCAGTGCCGACTTATCGCCTGCAGTGTCCGCTCCTTGAGTGA | 1407 | 51.03 | MLMMNQLTHRGLANLSKVYGGLLHMKMGVLHLVVVSTPEMAREVLQVQDSVFANRPARVAIKYLTYDRADMAFAQYGPSWRQMRKICVMKLFSRKRAESWASVREEVDSTLQSIAKRGGSAVNIGELALDLTKNITYRAAFGSSSREKQEEFVKILQEFSRLFGAFNFADFIPWLGWIQGKEFNKRLVKARGSLDEFIDKIIDDHIEKRKKQNNSGDESESEAELDMVDELMEFYSEDVAAEDLNSSIKFTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPDDLKKLQQELTDVVGLNRRLHESDLEKLTYLKCCIKETLRLHPPIPVLLHETSEASVVAGYSVPARSDVMINAWAINRDKTAWEDPETFKPERFLKKDAPDFKGSHFEFIPFGSGRRSCPGMQLGLYGLDLAVAHLVHCFSWELPDGMKASDLDMSDLFGLTAPRAIQLVAVPTYRLQCPLLE* | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 457047 | 458789 | + | Vvi3g29 | Vvi3g29 | 783704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi3g29 | 468 | Gene3D | Cytochrome P450 | 1 | 460 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | P450 superfamily signature | 265 | 282 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | P450 superfamily signature | 318 | 329 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | P450 superfamily signature | 395 | 404 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 397 | 406 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi3g29 | 468 | PANTHER | CYTOCHROME P450 84A1-RELATED | 1 | 467 | - | - | |
Vvi3g29 | 468 | Pfam | Cytochrome P450 | 8 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | SUPERFAMILY | Cytochrome P450 | 4 | 461 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PANTHER | CYTOCHROME P450 FAMILY MONOOXYGENASE | 1 | 467 | - | - | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 16 | 35 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 40 | 61 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 254 | 271 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 274 | 300 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 317 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 357 | 381 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 394 | 404 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi3g29 | 468 | PRINTS | E-class P450 group I signature | 404 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi3g29 | K09755 | - | vvi:100250277 | 935.25 |