Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g302 ATGATGAGGGTTGAAGGAAGGGCGTATCAGGAGTTGTCACCTAGTTACTATGGGATTTGTACAGTTGGAGGAATGCTCAGTGCCGGAACGATCCATCTCGCTATCACTCCTCTGGACGTCTTGAAAGTGAATATGCAGGTGAACCCAATCAAGTATAATAGTATTACATCAGGTTTGAATACCCTCTGGAAAGAACAAGGTCCTTCTGCCCTATGGAGGGGTTGGTCCGGCAAGTTATTTGGATATGGTGTTCAAGGGGGCTGCAAATTTGGTCTCTATGAATACTTCAAGAGGATTTACTCAGATGTGTTGGTAGATCAAAACAGGAGTGTCATATTCTTTGTCAGCAGTGCTTCTGCTCAAGTATTTGCTGATGTAGCCCTCTGCCCTTTTGAGGCTGTCAAAGTCCGAGTTCAAACACAGCCCCATTTCGCAAAGGGCTTGGCTGATGGGTTCCCAAAATTATATGCAACTGAAGGGCTCTCTGGCTTTTACAAAGGACTTTTTCCGCTTTGGGGGCGTAATCTTCCATTCTCTATGACGATGTTTTCAACATTTGAGCATTCAATAGACTTCATATATGACAACATTATCCAAAAAAAGAAAGAAGATTGCTCAGTGGCCCAGCAGCTTGGCGTGACATGTTTGGCGGGCTATGCAGCTGGAGCTTTTGGTACCTTAATCTCTAACCCTGCGGACAACATTGTTTCCTCCCTTTATAACAAAAACGCAGAAAATGTGTTGCAGGCTGCGAAGAATATTGGGTTTGCTAATTTGTTTACTAGGAGTCTTCCTCTTCGAATTACATTTGTGGGGCCTGTTGTGACATTGCAGTGGTTCTTTTACGACACCATTAAAGTTCTAAGTGGATTCCCTACAAGTGGAGGGCCTGTCAGGCATATCGAAGAAGCTGATAGATCCGCTTAA 927 44.12 MMRVEGRAYQELSPSYYGICTVGGMLSAGTIHLAITPLDVLKVNMQVNPIKYNSITSGLNTLWKEQGPSALWRGWSGKLFGYGVQGGCKFGLYEYFKRIYSDVLVDQNRSVIFFVSSASAQVFADVALCPFEAVKVRVQTQPHFAKGLADGFPKLYATEGLSGFYKGLFPLWGRNLPFSMTMFSTFEHSIDFIYDNIIQKKKEDCSVAQQLGVTCLAGYAAGAFGTLISNPADNIVSSLYNKNAENVLQAAKNIGFANLFTRSLPLRITFVGPVVTLQWFFYDTIKVLSGFPTSGGPVRHIEEADRSA* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2885252 2887990 + Vvi3g302 Vvi3g302 783977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g302 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Vvi3g302 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Vvi3g302 308 Gene3D Mitochondrial carrier domain 19 290 IPR023395 -
Vvi3g302 308 Pfam Mitochondrial carrier protein 114 195 IPR018108 -
Vvi3g302 308 Pfam Mitochondrial carrier protein 22 101 IPR018108 -
Vvi3g302 308 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 305 IPR044677 GO:0005315|GO:1990547
Vvi3g302 308 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 5 305 - -
Vvi3g302 308 SUPERFAMILY Mitochondrial carrier 18 284 IPR023395 -
Vvi3g302 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g302 K15102 - vvi:100258841 627.476