Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g34 ATGGACAGTCATGACTGTATAAATACTCTCAGAAATCACGCTGATTCACAACATCCAGTCATGGCATCTCCTCTGCAGTCTCTCCTCACCTTTCCCTCCCTCTTCTTCCTACTTTTCTCTCTTTTCCTTTTCATTATTTTCTTAAGAAATTTTTCAAGAAAACTCCCATATCCACCAGGGCCCAAAGGCCTGCCGATCATCGGAAATATGTTGATGATGAATCAACTCACCCACCGGGGACTAGCCAATCTCAGCAAGGTGTACGGTGGCCTGCTGCATATGAAGATGGGAGTCTTGCACTTAGTGGTCGTGTCCACCCCGGAGATGGCTCGTGAAGTTCTCCAGGTGCAGGACAGTGTTTTCGCCAACCGGCCAGCCAGGGTTGCGATAAAATATCTGACATATGATAGAGCGGACATGGCCTTCGCTCAATACGGACCCTCTTGGCGGCAGATGAGGAAGATTTGTGTGATGAAGCTCTTCAGTCGAAAACGGGCTGAGTCTTGGGCGTCAGTGAGGGAGGAGGTGGATTCAACGCTTCAAAGTATCGCCAAGAGAGGTGGGTCTGCTGTTAATATTGGTGAATTGGCGTTGGACCTTACCAAGAATATAACGTACAGGGCTGCGTTCGGGTCGAGTTCGCGCGAAAAACAGAAGGAGTTCGTGAAGATTTTGCAGGAGTTCTCGAGGCTTTTTGGGGCTTTCAACTTTGCAGATTTTATACCCTGGCTGGGTTGGATTCAAGGGAAGGAGTTCACTAAGCGGCTGGTCAAGGCTCGAGGATCACTTGATGAGTTCATCGATAAAATCATCGACGGTCACATTGAAAAGAGGAAGAAGCAGAATAACAGCGGAGATGAAAGTGAAAGTGAAGCAGAGTTGGACATAGTGGACGAGTTAATGGAGTTTTACAGCAAAGATGTTGCAGCGGAAGACTTGAATTCTTCAATCAAGTTCACAAGGGATAACATCAAAGCTATCATTATGGACGTGATGTTTGGTGGAACAGAAACTGTGGCATCGGCAATCGAGTGGGCAATGGCGGAGCTCATGAAAAGCCCAGATGATCTGAAGAAACTGCAGCAAGAATTAATAGATGTGGTGGGCTTGAACCGAAGGTTACACGAGTCCGATCTGGAGAAGCTCACCTACCTCAAGTGCTGCATCAAGGAAACCCTCCGGCTCCACCCTCCAATCCCAGTCCTCCTCCACGAGACCGCCGAGGACAGTGTGGTGGCCGGATACTCAGTCCCAGCACGCTCAGATGTCATGATCAACGCCTGGGCTATAAACCGAGACAAGACCGCCTGGGAGGATCCGGAGACGTTCAAGCCAGAGAGGTTTCTGAAGGACGCACCTGATTTCAAAGGGAGCCACTTTGAGTTCATTCCATTTGGGTCCGGCCGGCGGTCGTGCCCGGGTATGCAGCTTGGGCTGTATGGATTGGATCTGGCTGTGGGTCACCTTGTTCATTGTTTTAGCTGGGAACTGCCTGATGGAATGAAGGCTAGTGATCTGGATATGAGCGATGTGTTTGGACTCACTGCTCCGAGGGCGATACAGCTGATCGCAGTGCCGACTTATCGCCTGCAGTGTCTGCTCCTTGAGTGA 1611 49.84 MDSHDCINTLRNHADSQHPVMASPLQSLLTFPSLFFLLFSLFLFIIFLRNFSRKLPYPPGPKGLPIIGNMLMMNQLTHRGLANLSKVYGGLLHMKMGVLHLVVVSTPEMAREVLQVQDSVFANRPARVAIKYLTYDRADMAFAQYGPSWRQMRKICVMKLFSRKRAESWASVREEVDSTLQSIAKRGGSAVNIGELALDLTKNITYRAAFGSSSREKQKEFVKILQEFSRLFGAFNFADFIPWLGWIQGKEFTKRLVKARGSLDEFIDKIIDGHIEKRKKQNNSGDESESEAELDIVDELMEFYSKDVAAEDLNSSIKFTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPDDLKKLQQELIDVVGLNRRLHESDLEKLTYLKCCIKETLRLHPPIPVLLHETAEDSVVAGYSVPARSDVMINAWAINRDKTAWEDPETFKPERFLKDAPDFKGSHFEFIPFGSGRRSCPGMQLGLYGLDLAVGHLVHCFSWELPDGMKASDLDMSDVFGLTAPRAIQLIAVPTYRLQCLLLE* 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 510037 511819 + Vvi3g34 Vvi3g34 783709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g34 536 Pfam Cytochrome P450 58 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Vvi3g34 536 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 26 534 - -
Vvi3g34 536 Gene3D Cytochrome P450 48 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 SUPERFAMILY Cytochrome P450 58 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PANTHER CYTOCHROME P450 84A1-RELATED 26 534 - -
Vvi3g34 536 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g34 536 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g34 K09755 - vvi:100253771 978.778