Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g390 ATGGCCACGAAGCAAGAAGCTGGGAGGCACCAGGAGGTTGGCCACAAGAGCCTTTTGCAGAGTGATGCTCTTTATCAGTATATACTTGAAACCAGTGTGTACCCAAGAGAGCCCGAATCCATGAAGGAGCTCAGAGAGTTGACTGCCCAGCATCCATGGAACATCATGACTACGTCTGCTGATGAAGGGCAGTTCTTGAACATGCTTCTCAAGCTCATCAATGCCAAGAACACCATGGAGATAGGCGTCTACACTGGCTACTCTCTTCTGGCCACAGCCCTTGCTCTCCCCGATGACGGAAAGATCCTGGCTATGGACATCAACAAAGAAAATTACGAGCTGGGCCTGCCAGTAATTCAAAAGGCAGGGGTTGCCCACAAGATTGACTTCAAAGAAGGCCCTGCTTTGCCTGTTCTTGATCAGATGATCGAAGATGGGAAGTATCACGGGTCGTTCGACTTCATATTCGTGGACGCAGACAAGGACAATTATCTGAACTACCACAAGAGATTGATCGATTTGGTGAAGGTGGGGGGAATCATCGGCTACGACAACACCCTCTGGAACGGGTCGGTGGTGGCGCCACCCGATGCTCCGCTGCGGAAGTACGTGAGGTACTACAGAGACTTCGTGTTGGAGCTGAACAAGGCTCTTGCTGCTGACCCAAGAATCGAGATCTGTATGCTTCCGGTTGGTGACGGGATCACCCTTTGCCGTCGGCTAAGCTGA 729 51.44 MATKQEAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAQHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYLNYHKRLIDLVKVGGIIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRLS* 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3733845 3735258 - Vvi3g390 Vvi3g390 784065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g390 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 240 IPR029063 -
Vvi3g390 242 PANTHER O-METHYLTRANSFERASE-RELATED 4 241 - -
Vvi3g390 242 Gene3D Vaccinia Virus protein VP39 16 242 IPR029063 -
Vvi3g390 242 Pfam O-methyltransferase 30 241 IPR002935 GO:0008171
Vvi3g390 242 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 17 241 IPR002935 GO:0008171
Vvi3g390 242 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 4 241 - -
Vvi3g390 242 CDD AdoMet_MTases 80 181 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g390 Vvi7g1046 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g390 K00588 - vvi:100233087 488.804