Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g410 ATGGAGATTCTTTCTATTTTCTGTTACATCTTGCTCTTTCTCTCTACTCTTCTTTCTTATCCCTTCTTATTTTTAAAGAAACAAAAGAAGAAAGTATCAAAGCAAAGAGTTTATAAGCTTCCCCCAGGCTCAATGGGGTGGCCTTATATTGGAGAGACTCTCCAACTCTACTCCCAAGACCCCACTGTCTTCTTTGATTCAAAACAGGAAAGATATGGAGAAATATTCAAAACCCACATACTTGGGTGTCCTTGTGTCATGCTGTCTAGCCCTGAGGCTGCTCGGTTTGTGCTGGTGACTCGGGCTCATTTGTTCAAGCCTACGTACCCCAAGAGTAAAGAGAAGATGATTGGCCCTTCTGCGCTGTTTTTTCACCAAGGAGACTACCATGCTCAGCTGAGGAAGCTGGTTCAGAGCTCACTATCTCCAGATTCTATTCGGAAACTAGTCCCCAGTATTGAAGCCTTGGCTATTTCTGCTTTGGAGTCATGGGCCGGCGGGCAGGTCATTAACACCTTTCATGCCATGAAGAAGTTATCTTTTGATGTTGGCATTCTTTCTGTTTTTGGTCACTTGGAGGGTAATTACAGAGACGAGCTTACCAAGAACTACTGCATAGTAGACAAAGGTTACAATTCCTTTCCCACAAATATACCAGGAACGGCATACAGCAAAGCAATCCTGGCAAGGAAAAGGCTTAATCAGATTGTGAGAGAGATCATTTGTGAGAGGAAGGAGAAGAGACTGGTGGAAAAGGATCTGTTGGGCCATCTACTGAACTTCAAAGATGAAAAGGGGCAAATTTTAACTGAGGATCAAATCGCCGACAACATCATTGGCGTACTGTTTGCTGCTCAGGACACAACGGCTAGTGTCTTAACTTGGGTCCTCAAATATCTCCATGATGATCAGAAACTTCTAGAATCTGTAAAGGCTGAGCAGAAAGCAATATTTGAATCAAACAGTGGAGGAAATCGGCCTTTGACATGGGATCAGACTAGAAACATGCCACTTACTTATAGAGTCATATTAGAGAGCTTGAGAATGGCAAGCATCATATCTTTCACCTTTAGGGAAGCCGTAGTTGATGTAGAGTACAAGGGATATCTCATTCCAAAAGGTTGGAAGGTGATGCCACTGTTCAGGAACATTCATCACAATCCGGAATTCTTCTCTGATCCTCAGAATTTCGATCCATCTAGGTTTGAGGTTGCTCCGAAACCGAATAGTTTTTTGCCATTTGGTAGTGGAGTCCATGCTTGTCCTGGAAATGAGCTTGCCAAGCTTGAGATCCTTATTTTGACTCATCATCTAGTTACCAAGTTCAGGTGGGAAGTGGTGGGATCACAAGGTGGAATTGAGTATGGACCATTCCCTGTTCCTCAGCGTGGACTCCCAGCCAGGTTTTGGAAACTGGAAAGCAAGAAGAGTGCCCCTTAA 1440 43.61 MEILSIFCYILLFLSTLLSYPFLFLKKQKKKVSKQRVYKLPPGSMGWPYIGETLQLYSQDPTVFFDSKQERYGEIFKTHILGCPCVMLSSPEAARFVLVTRAHLFKPTYPKSKEKMIGPSALFFHQGDYHAQLRKLVQSSLSPDSIRKLVPSIEALAISALESWAGGQVINTFHAMKKLSFDVGILSVFGHLEGNYRDELTKNYCIVDKGYNSFPTNIPGTAYSKAILARKRLNQIVREIICERKEKRLVEKDLLGHLLNFKDEKGQILTEDQIADNIIGVLFAAQDTTASVLTWVLKYLHDDQKLLESVKAEQKAIFESNSGGNRPLTWDQTRNMPLTYRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFFSDPQNFDPSRFEVAPKPNSFLPFGSGVHACPGNELAKLEILILTHHLVTKFRWEVVGSQGGIEYGPFPVPQRGLPARFWKLESKKSAP* 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3944461 3947232 + Vvi3g410 Vvi3g410 784085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g410 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vvi3g410 479 Pfam Cytochrome P450 41 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 SUPERFAMILY Cytochrome P450 36 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g410 479 PANTHER CYTOCHROME P450 26 8 471 - -
Vvi3g410 479 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 471 - -
Vvi3g410 479 Gene3D Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g410 Vvi18g765 ECH
Vvi3g410 Vvi7g1076 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g410 K09843 - vvi:100246968 957.977