Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g439 ATGCGATATGGGGAAGAAGGCCCAAACTTGTATTTGGGATTGGCTAGACGGAAAAATTACATAGAAGTGCGCTACCACCAACCAACCAAAACTAATGGTTATTATATATGGCTCAGTGGGTACCTTTCCTCTGTGATATTAGTTACTGCAACAGCCAAAGTCATTGAGGTTGATGGCCTTGTAGAGAGGTTGCTCGGCACAGATGTAGTTCCACCGGCAATGAATTCGGAAACCGGGGTTTCCACCAAGGACGTTGTGATCGCACCTGAAACTGGCGTATCGGCACGTCTGTTCAAGCCGAACTCCGTTAACCCAGAGAAAAGGCTTCCTCTACTAGTTTACTTCCATGGCGGAGGCTTCTCCCTATGCTCCCCTTACTGCTCCATATACCATAATTACCTTACTTCTCTAGTCCTCGAAGCTGACATCATTGCAGTGTCTGTTGCCTACAGACTAGCCCCTGAAAACCCTGTCCCTGCAGCTTATGAAGATTCATGGGCTGCGCTTCAGTGGGTGGTTTCCCATTGTAATGGGCAAGGCTCCGAACCTTGGCTGAAAGACCACGCTGATTTTCAGCGAGTTTTTTTGGCTGGAGACAGTGCAGGAGGCAATATTTCACACAACTTGGCTGTACAAGCCGGGGTTGAAGGGCTGGGTGGTGTGAAGCTGCAAGGAATTTGTGTAGTTCATCCATATTTTGGGAGAAAATCAGAAGATGATGTGGCTTTATGTGTGTCCAACAACTAG 747 47.66 MRYGEEGPNLYLGLARRKNYIEVRYHQPTKTNGYYIWLSGYLSSVILVTATAKVIEVDGLVERLLGTDVVPPAMNSETGVSTKDVVIAPETGVSARLFKPNSVNPEKRLPLLVYFHGGGFSLCSPYCSIYHNYLTSLVLEADIIAVSVAYRLAPENPVPAAYEDSWAALQWVVSHCNGQGSEPWLKDHADFQRVFLAGDSAGGNISHNLAVQAGVEGLGGVKLQGICVVHPYFGRKSEDDVALCVSNN* 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4254509 4260217 + Vvi3g439 Vvi3g439 784114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g439 248 Gene3D alpha/beta hydrolase 52 245 IPR029058 -
Vvi3g439 248 PANTHER ARYLACETAMIDE DEACETYLASE 56 239 - -
Vvi3g439 248 Pfam alpha/beta hydrolase fold 112 234 IPR013094 GO:0016787
Vvi3g439 248 SUPERFAMILY alpha/beta-Hydrolases 39 234 IPR029058 -
Vvi3g439 248 PANTHER CARBOXYLESTERASE 12 ISOFORM X1-RELATED 56 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g439 Vvi18g788 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g439 - - vvi:100257314 380.563