Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g441 ATGTTCATAGTTCATCTCACAAAGTTCATACTCTCTTTTACAAAGTTTATACCATCTCTTACAAAGTTCGTACCCTATATCACAAAGTTTGTACTCCTTTTCACAAAGTTTGTATCAATTCTCGTAAAGTTTGTATTCTCTCTCACAAAGTTTGTATCATATCACAAAGTTCGTACTCTCACTCACAAAGTTTGTACTATATCTTACAAAGTTCGTACCACATTTCAAAAAGTTCATACCATCTCTCACAAAGTTTGTACCCCATCTCAAAAAGTTCATACTCTCTCTCACAAAGTTTGTATTATCACTCACAAAGTTCGTACCATCTCACAAAATTCATACCCCATATCACAAAGTTTGTACCCCATCTCACAAAGTTTGTATCCTCTCTCTCAAGTAGTCTGTACAATCTATCACAAAATTTGTACCATCTCTCACAAAATTCATACATCATCTCACAAAGTTCGTACACCCTCTCACAAAGTTCGTATACTCTCTCATAAAGTTCATACCACATCTCACAAAGTTCGTACCATATCTCATAAAGTTCGTACCATCTCTTACAAAGTTTGTATTATCTCTCACAAAGTTCATATCATTTCTCACAAAATCTATACCCTATCTCACAAAGTTCGTACCCCATCTCACATTGTTCGTACCATCTCTCACAATTTTCATACCCCTCTCACATTGCTTTACATCCCTAAAATCAACGACCAATCTCAGAAACTCCCTCTTTTAGTCTACTTCCATGGAGGAGCTTTCTGCATCGAAACGTTCTCTTCTCCTACATATCACAACTATCTGGACTCCCTCGTTGCTGAAGCCAACGTCGTCGCCGTCTCCATCGAGTACAGAAGAGCCCCGGAGCATCCTCTCCCGGTTGCCTACGACGATTGCTGGGCCGCAGTCAAGTGGCTAGTTTCCCATTCCAACAGCCAAGGCCCAGAGCCGTGGCTCAATGACTACGCCGATCTCGACCGCCTCTTCTTCGCCGGCGATAGTGCTGGGGCAAATCTCTCCCACAACATGGCCATACGCGCCGGGACTCGAGGCCACGAATTGGGCAGCGGTCTCGTGGATTCTCTATGGCTTTTCGTCTTAGGTTGCCAAAGAGTACTTGTTTTTGTGGCTGAGAAGGATACGTTAAGGGATAGAGGGTGGTTTTATCATGAGACGTTGGGGAAGAGTGGGTGGAGTGGTGTTGTGGAGGTGATGGAGGCTGAGGGAGAGGACCATGTGTTTCATCTCTTCAACCCCACTTGCGACAAGGCTGTGGCCATGCTCAAACAAATGGCTATGTTCTTGAATATGGCTCAGTGCAATTCGGTTAACTTGCTTGTTTGTTGGCCATATCTCTTCCCATTCACACAAGAGGCTACAACTAGCTCAATATTGCATATAATTTCCAACCATCCAAATGCACGACAAAACGCATTTATCGCTTTAAAAATTGCATCCACCGATCAAAGTTACCTCCCTTTTCAGTTTCATAGCTCAAAATTATGTATAAATAAGAAGAAAACGCCATCATTTTTAGGGTCAGCTTATTTTTTCAAGGATGGTAGAGTAGAGAGGCTTTACATCCCTAAAATCACTTACCCATCTCAGAAGCTACCCCTTTTAATCTACTTCCACGGCGGAGGTTTCTGCATCGAAACCTCCTCTTCTCCCACATATCACAACTATCTGGACTCCCTCGTCGCCGAAGGTAACGTCGTCGCCGTCTCCGTCAATTACAGAAGAGCCCCGGAAGACCCTCTCCCTGTTGCCTACGACGATTGCTGGACTGCATTTAAATGGGTCGTTTCCCACTCTAACAGCCAAGGCCTAGAGCCTTGGCTCAACGACCACGCCGATTTCAACCACCTCTTCCTCGCCGGCGACGATGCCGGAGCAAACCTCGCCCACAACATGGCCATACGAGCCGGGACTCGAGTCAACGAACTGGGTGGCGTCAAGGTCTCAGGAATCATTCTGTTTGGGCCTTCTTCCCCATATCGCATTTGGCCAAAAGATGTAGTCATCACCCAACACAAACCGTAG 2046 44.82 MFIVHLTKFILSFTKFIPSLTKFVPYITKFVLLFTKFVSILVKFVFSLTKFVSYHKVRTLTHKVCTISYKVRTTFQKVHTISHKVCTPSQKVHTLSHKVCIITHKVRTISQNSYPISQSLYPISQSLYPLSQVVCTIYHKICTISHKIHTSSHKVRTPSHKVRILSHKVHTTSHKVRTISHKVRTISYKVCIISHKVHIISHKIYTLSHKVRTPSHIVRTISHNFHTPLTLLYIPKINDQSQKLPLLVYFHGGAFCIETFSSPTYHNYLDSLVAEANVVAVSIEYRRAPEHPLPVAYDDCWAAVKWLVSHSNSQGPEPWLNDYADLDRLFFAGDSAGANLSHNMAIRAGTRGHELGSGLVDSLWLFVLGCQRVLVFVAEKDTLRDRGWFYHETLGKSGWSGVVEVMEAEGEDHVFHLFNPTCDKAVAMLKQMAMFLNMAQCNSVNLLVCWPYLFPFTQEATTSSILHIISNHPNARQNAFIALKIASTDQSYLPFQFHSSKLCINKKKTPSFLGSAYFFKDGRVERLYIPKITYPSQKLPLLIYFHGGGFCIETSSSPTYHNYLDSLVAEGNVVAVSVNYRRAPEDPLPVAYDDCWTAFKWVVSHSNSQGLEPWLNDHADFNHLFLAGDDAGANLAHNMAIRAGTRVNELGGVKVSGIILFGPSSPYRIWPKDVVITQHKP* 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4262853 4270341 - Vvi3g441 Vvi3g441 784116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g441 681 SUPERFAMILY alpha/beta-Hydrolases 526 668 IPR029058 -
Vvi3g441 681 Gene3D alpha/beta hydrolase 520 675 IPR029058 -
Vvi3g441 681 PANTHER ARYLACETAMIDE DEACETYLASE 524 663 - -
Vvi3g441 681 PANTHER ARYLACETAMIDE DEACETYLASE 229 350 - -
Vvi3g441 681 PANTHER ARYLACETAMIDE DEACETYLASE 367 437 - -
Vvi3g441 681 SUPERFAMILY alpha/beta-Hydrolases 232 437 IPR029058 -
Vvi3g441 681 Pfam alpha/beta hydrolase fold 247 353 IPR013094 GO:0016787
Vvi3g441 681 Pfam alpha/beta hydrolase fold 368 416 IPR013094 GO:0016787
Vvi3g441 681 Pfam alpha/beta hydrolase fold 542 664 IPR013094 GO:0016787
Vvi3g441 681 PANTHER CARBOXYLESTERASE 13-RELATED 229 350 - -
Vvi3g441 681 PANTHER CARBOXYLESTERASE 13-RELATED 524 663 - -
Vvi3g441 681 PANTHER CARBOXYLESTERASE 13-RELATED 367 437 - -
Vvi3g441 681 Gene3D alpha/beta hydrolase 149 444 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g441 - - vvi:100245277 417.542