Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g466 ATGGGCCACAGAGTGCACTTTTCCTACTTCATTATTCCCTTCTTGTGTCTATTCTCATTTTTGGTTCCTTCTGCTTATAGCCAGTTTCTCGATTACAAGTTCTATGATAGATCATGCCCTGACTTGCCAGTGATAGTCGTGCGTAATGTTTGGGAAGCTTACTGGAAGGAATCCAGAGTTGCTGCAACCCTCCTTCGGTTGCACTTCCATGACTGTATAGTAAATGGCTGTGACGCCTCTGTGCTTCTTGATGACACTGAAGATTTCAAAGGGGAAAAAAGCACGCCTGTCAACCGCATGTTGCCCCTTGCATTTGAAGTCATTGACAATATAAAAGAAGATGTTGAAAGTGCTTGCCCCTCAACTGTTTCATGTGTTGATATACTGACTCTTGCAGCAAGAGAAGGTGTTATTTTGTCAGGAGGACGTTACTGGAATGTTCCATTAGGGCGACGAGATGGAACAACATCCGATCCAAAAGCAGTTGTACAGATTCCTGCACCTTTTGAGCCTCTAGAAAACATCACTGCCAAATTCACTTCAAAGGGTCTTGACCTGAAGGATGTTGTAGCACTCTCAGGAGCTCACACCATAGGTTTTGCCCAATGCTTCACCTTCAAGAGCAGGCTCTTCAACTTTCAAGGCACTGGCCAGCCTGATCCTACCCTGGATGCTTCTGTCCTCTCAGACTTGAGGAAAACTTGTCCCAACAAAGATAGTGCAGACACCAACATTGCTCCTCTTGATTCTGTAAGCACTAACAGATTTGACAATGCCTATTATGGGAACCTTGTCCGCAACACCGGCCTTCTGAAATCTGATCAAGCCTTAATGACCGATCCAGACACTGCTGCTTTAGTGAACAGATATAGAACGAACCCACGTTATTTCTTCCGTGATTTTGTTACATCCATGGTCAAGCTGAGCTATGTTGGGATACTCACAGGGGAAAAAGGGCAAATCAGGAAGGACTGTAGGTTTGTGAACTGA 990 44.85 MGHRVHFSYFIIPFLCLFSFLVPSAYSQFLDYKFYDRSCPDLPVIVVRNVWEAYWKESRVAATLLRLHFHDCIVNGCDASVLLDDTEDFKGEKSTPVNRMLPLAFEVIDNIKEDVESACPSTVSCVDILTLAAREGVILSGGRYWNVPLGRRDGTTSDPKAVVQIPAPFEPLENITAKFTSKGLDLKDVVALSGAHTIGFAQCFTFKSRLFNFQGTGQPDPTLDASVLSDLRKTCPNKDSADTNIAPLDSVSTNRFDNAYYGNLVRNTGLLKSDQALMTDPDTAALVNRYRTNPRYFFRDFVTSMVKLSYVGILTGEKGQIRKDCRFVN* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4477402 4479789 - Vvi3g466 Vvi3g466 784141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g466 329 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vvi3g466 329 SUPERFAMILY Heme-dependent peroxidases 30 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Vvi3g466 329 Pfam Peroxidase 50 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 Gene3D Peroxidase, domain 2 166 308 - -
Vvi3g466 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vvi3g466 329 PANTHER PEROXIDASE 72-RELATED 9 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PANTHER PEROXIDASE 10 9 328 - -
Vvi3g466 329 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 ProSiteProfiles Plant heme peroxidase family profile. 29 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi3g466 329 Gene3D - 33 329 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g466 K00430 - vvi:100264023 672.93