Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g513 ATGTGTTTATTCTTTCTCTATAAATCGATTAATTTTTTATTTATTAATTTATGTTTGGAATCTTTGATAAGCACTCACAGAAAGTGTGACCTGGTATGTATAAATATCTCTGTTCTGAACAGAGAAAACTGTGAAAACAGAATATATAGAAAACCATTTTTCTCTCTCCGACCCTCTTTCTCTTCACTCTGGTACAATCTAGTCATGGGATTCTCCCTTCGCCCTCAAGATATCACAGTTTTTGGGCTTCTTCTTGCTACAATCTGTCTGTTGTTGGCAACAGTACTTAATGCCAAAGGGAACAAGAAGAGAGGCAAAAGGCCACCAGAGCCGTCCGGGCGATGGCCTCTTATCGGTCACCTTCATCTTCTAGGAGCAGACAAGCTGCTACATCGGACACTTGGAGACATGGCTGATAAGTATGGACCCATCTTTTGCGTTCGTCTTGGCCTCAAAAAAACATTGGTGGTTAGTAGCTGGGAAGTAGCAAAGGAATGTTACACTACAAGTGACAAGGTATTCGCAACTCGACCAAGATCCTTAGCAATAAAGCTCATAGGCTATGATCATGGCTCGTTTGTCTTTGCTCCTTATGGACCATACTGGCGTGATGTGCGGAAGTTAGCCATGGTTGAGCTGCTGTCAAACCGCCAGCTTGAGATGCACAAGCATGTCCAGGACTCAGAAGTCAAGATCTTAATAAAAGAGCTTTATGGGCAATGGGCAAGCAACAAGGACGGCCCCGCTTTGGTGGAGATGAAGGAAAGATTTGGGAACTTGGCACTGAACGTAGTGGTGAGAGCAATTGCTGGGAAACGGTATTTTGGGACCCATGCCTGTGGTGATGAGCCAAAACGGGCCAAGAAGGCCTTTGAGGATTTCATTATTCTACTGGGGCTGTTCATGGTCTCGGATGTCATCCCTTTTCTCGGCTGGTTGGACACGATGAAAGGGTTTACCGCTGAAATGAAGAGAGTAGCTAAGGAGGTGGATTATGTGCTTGGAAGCTGGGTGGAGGAGCATCGCCAGAATAGGCTTTCTGCGAACGACAATGGGGCTGAGCAAGACTTCATACATGCCATGCTTTCTGTCATAGATGATGGCCAATTCTCTGGTCGTGATCCTGACACCATCATTAAGGGCACTTGCTCGAACCTCATATTAGCTGGCAATGACACAACATCTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCATGCGCTAAAAAAAGCACAAGCAGAGCTGGAAATCCATGTGGGAAAGCATCGCCAAGTGGATGGATCAGATATAAAAAACCTCGTCTACTTGCAAGCCATCGTCAAGGAAACATTACGATTGTACCCTCCTGGGCCACTTTCCCTGCCACATGAGGCCATGGAAGATTGCACTGTGGCTGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGTTGGACCCTTTGGAGTTCCAACCAGAGAGGTTCCTGACAAAGCATGCAGGTTTGGATGTTAGGGGTAAAAATTATGAACTTCTACCCTTTGGTTCAGGTAGAAGGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGACGCTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGCGGTTGCAGATTCACCGGTGGATATGACTGAAAGTCCTGGGTTGACTGCCCCCAAAGCAACCCCACTGGAGGTCACCATTGTTCCAAGGCTACCTTTCGAGCTCTATAAAAAAAAAAATAATTTGGCAATCAAAAAATGGGAAATGGTATTTGTGTTTTGA 1824 45.94 MCLFFLYKSINFLFINLCLESLISTHRKCDLVCINISVLNRENCENRIYRKPFFSLRPSFSSLWYNLVMGFSLRPQDITVFGLLLATICLLLATVLNAKGNKKRGKRPPEPSGRWPLIGHLHLLGADKLLHRTLGDMADKYGPIFCVRLGLKKTLVVSSWEVAKECYTTSDKVFATRPRSLAIKLIGYDHGSFVFAPYGPYWRDVRKLAMVELLSNRQLEMHKHVQDSEVKILIKELYGQWASNKDGPALVEMKERFGNLALNVVVRAIAGKRYFGTHACGDEPKRAKKAFEDFIILLGLFMVSDVIPFLGWLDTMKGFTAEMKRVAKEVDYVLGSWVEEHRQNRLSANDNGAEQDFIHAMLSVIDDGQFSGRDPDTIIKGTCSNLILAGNDTTSITLTWALSLLLNNRHALKKAQAELEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSLPHEAMEDCTVAGFHIQAGTRLLVNLWKLHRDPRVWLDPLEFQPERFLTKHAGLDVRGKNYELLPFGSGRRVCPGISFALELTHLTLARLLHGFELGAVADSPVDMTESPGLTAPKATPLEVTIVPRLPFELYKKKNNLAIKKWEMVFVF* 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4969556 4976362 + Vvi3g513 Vvi3g513 784188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g513 607 Pfam Cytochrome P450 108 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PANTHER CYTOCHROME P450 82A1-LIKE 119 591 - -
Vvi3g513 607 SUPERFAMILY Cytochrome P450 108 584 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PANTHER CYTOCHROME P450 82C3-RELATED 119 591 - -
Vvi3g513 607 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 523 532 IPR017972 GO:0005506|GO:0016705
Vvi3g513 607 PRINTS E-class P450 group I signature 138 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 398 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 162 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 482 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 260 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 441 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 378 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 520 530 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS E-class P450 group I signature 530 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS P450 superfamily signature 521 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS P450 superfamily signature 389 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g513 607 Gene3D Cytochrome P450 94 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g513 Vvi18g858 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g513 - - vvi:100260664 1134.4