Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi3g518 | ATGAAGAGAGTAGCTAAGGAGGTGGATTATGTGCTTGGAAGCTGGGTGGAGGAGCATCGCCAGAATAGGCTTTCTGCGAACGACAATAGGGCTGAGCAAGACTTCATACATGCCATGCTTTCTGTCATAGATGATGGCCAATTCTCTGGCCGTGATCCTGACACCATCATTAAGGGCACTTGCTCGAACCTCATATTAGCTGGCTATGAATCAACATTTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCATGCGCTAAAAAATGCACAAGAAGAGCTGGAAATCCATGTGGGAAAGCATCGCCAAGTGGATGGATCAGATATAAAGAACCTAGTCTACTTGCAAGCCATCGTCAAGGAAACATTACGACTGTACCCTCCTGGGCCACTTTCCCTGCCACATGAGGCCATTGAAAATTGCACTGTGGCTGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGTTGGACCCTTTGGAGTTCCAACCAGAGAGGTTCCTGACAAAGCATGCAGGTTTGGATGTTAGGGGTAAAAATTATGAACTTCTACCCTTTGGTTCAGGTAGAAAGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGACGCTAGCAAGACTGCTTCATGGTTTTGAATTGGGAGCGGTTGCAGATTCACGGGTGGATATGACTGAAAGTCCTGGGTTGACTGCCCTCAAAGCAACTCCACTGGAGGTCACAATTGTTCCAAGGCTACCTTTCGAGCTCTATAGTTATGAAGCAGCATAG | 822 | 47.81 | MKRVAKEVDYVLGSWVEEHRQNRLSANDNRAEQDFIHAMLSVIDDGQFSGRDPDTIIKGTCSNLILAGYESTFITLTWALSLLLNNRHALKNAQEELEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSLPHEAIENCTVAGFHIQAGTRLLVNLWKLHRDPRVWLDPLEFQPERFLTKHAGLDVRGKNYELLPFGSGRKVCPGISFALELTHLTLARLLHGFELGAVADSRVDMTESPGLTALKATPLEVTIVPRLPFELYSYEAA* | 274 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5003383 | 5004868 | + | Vvi3g518 | Vvi3g518 | 784193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi3g518 | 273 | PANTHER | CYTOCHROME P450 82C3-RELATED | 1 | 269 | - | - | |
| Vvi3g518 | 273 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 201 | 210 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi3g518 | 273 | PANTHER | CYTOCHROME P450 82A1-LIKE | 1 | 269 | - | - | |
| Vvi3g518 | 273 | Gene3D | Cytochrome P450 | 1 | 262 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | Pfam | Cytochrome P450 | 2 | 255 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | SUPERFAMILY | Cytochrome P450 | 2 | 262 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | P450 superfamily signature | 67 | 84 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | P450 superfamily signature | 120 | 131 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | P450 superfamily signature | 199 | 208 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 56 | 73 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 76 | 102 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 119 | 137 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 160 | 184 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 198 | 208 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi3g518 | 273 | PRINTS | E-class P450 group I signature | 208 | 231 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi3g518 | - | K23136 | vri:117911111 | 535.413 |