Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g519 ATGCTGTCTGTTATTGAGGATGGTCAGTTCTCTGATCATGACCATGACACTGTCATTAACGCTACTTGCTTGACTCTAATAATAGGCGGCTCTGATTCAACGGTGATCACACTGACCTGGGCCCTCTGTCCGCTAATGAACAATCCCAGCACTCTAAAAAGAGCACAAGATGAGTTAGACATCAAAGTGGGAAAGCATCGCCAAGTGGATGAGTCAGACATAAAGAACCTAGTCTACTTGCAAGCCATCATCAAGGAAACCTTACGACTGTACCCTGCTGCACCGCTTTCAGTGCCACGTGAGGCCATGGAGGATTGCACCATGGCAGGCTTCCACATCCAAGCTGGGACGCGCCTTTTGGTTAACCTCTGGAAGTTGTACAAGAACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTAACGAAGCATGTGGATTTGGATGTTAGGGGTCAAAATTTTGAATTTCTGCCATTTGGGTCAGGCAGAAGGGTATGCCCAGGAATCTCATTTGCGCTTGAGTTTCTTGTTTGTGTTGAGCCTAGCTCATATTTTTAA 570 46.84 MLSVIEDGQFSDHDHDTVINATCLTLIIGGSDSTVITLTWALCPLMNNPSTLKRAQDELDIKVGKHRQVDESDIKNLVYLQAIIKETLRLYPAAPLSVPREAMEDCTMAGFHIQAGTRLLVNLWKLYKNPRIWSDPLEFQPERFLTKHVDLDVRGQNFEFLPFGSGRRVCPGISFALEFLVCVEPSSYF* 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5006519 5008252 + Vvi3g519 Vvi3g519 784194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g519 189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 163 172 IPR017972 GO:0005506|GO:0016705
Vvi3g519 189 PANTHER CYTOCHROME P450 82A1-LIKE 1 182 - -
Vvi3g519 189 SUPERFAMILY Cytochrome P450 11 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS E-class P450 group I signature 160 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PANTHER CYTOCHROME P450 82C3-RELATED 1 182 - -
Vvi3g519 189 Pfam Cytochrome P450 15 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS P450 superfamily signature 161 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 PRINTS P450 superfamily signature 170 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g519 189 Gene3D Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g519 Vvi18g854 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g519 - K23136 vvi:100262353 365.925