Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g520 ATGGGGCAATTTATGGTTTCTGATGCACTACCCTTCCTTGGATGGTTAGACACAGTGAGGGGATATACAGCGAAAATGAAGGGAACAGCTAGGCAGTTGGATCGGGTTATTGGAAGATGGGTGGAGGAGCATCGTCAGAAGAGGCTTTCCGGAAGCATCAATGACGCTGAGCAAGACTTCATTCATGCCATGCTGTCTGTTATAGATGATGCTCAGTTATCTGGTCATGACCATGACCATGATACTGTCATCAAAGCCACTTGCTTGACTGTCATGTTGGCGGGCAATGATACAATAGCGGTCACACTCACCTGGGCCCTCTCTCTGCTAATGAACAACCCTCGTGCACTAAAAAAGGCACAAGAAGAGTTGGACTTTCATGTGGGAAGGAATCAGCAAGTGTACGAATCAGATATAAAGAAGCTAGTCTACTTGCAAGCCATTATCAAGGAGACCTTACGACTATACCCTGCTGGGCCGCTTGCACTGCCACATGAGGCCATGGAGGACTGCACTATTGCAGGCTTCCACATCCAAGCTGGGACTCGCCTTCTGGTTAACCTCTGGAAGTTACACCGCGATCCCACAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTCCTGACAAAGCATGTGGGTTTGGACGTTGGGGGTCAACATTTTGAACTTCTACCATTTGGGTCAGGCAGAAGGATGTGCCCAGGAATCTCACTTGCTCTGGAGATCCTGCAGCTGACACTAGCCAGATTGCTTCATGGTTTTGAATTGGGAGTAGTTTCAGATTCACCCCTGGATATGACTGAAGGTGTTGGGCTCGCTATGCCTAAAGCAACTCCACTGGAGGTCACCCTAGTCCCAAGGCTACCCTCCGAGCTCTACCACTAA 891 49.16 MGQFMVSDALPFLGWLDTVRGYTAKMKGTARQLDRVIGRWVEEHRQKRLSGSINDAEQDFIHAMLSVIDDAQLSGHDHDHDTVIKATCLTVMLAGNDTIAVTLTWALSLLMNNPRALKKAQEELDFHVGRNQQVYESDIKKLVYLQAIIKETLRLYPAGPLALPHEAMEDCTIAGFHIQAGTRLLVNLWKLHRDPTIWSDPLEFQPERFLTKHVGLDVGGQHFELLPFGSGRRMCPGISLALEILQLTLARLLHGFELGVVSDSPLDMTEGVGLAMPKATPLEVTLVPRLPSELYH* 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5017308 5018886 + Vvi3g520 Vvi3g520 784195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g520 296 PANTHER CYTOCHROME P450 82A1-LIKE 1 296 - -
Vvi3g520 296 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 228 237 IPR017972 GO:0005506|GO:0016705
Vvi3g520 296 SUPERFAMILY Cytochrome P450 4 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 Pfam Cytochrome P450 24 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS P450 superfamily signature 94 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 83 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 103 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 146 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 187 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g520 296 PANTHER CYTOCHROME P450 82C3-RELATED 1 296 - -
Vvi3g520 296 Gene3D Cytochrome P450 1 290 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g520 - K23136 vvi:100267513 600.127