Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g521 ATGGTGAGCGAAGTAGCTGGGAAACGGTATTTTGGCACCTCAAGACGGTGCCGGAAGGCCCTTGAAGATTTGTTATATCTGTCGGGGATATTTATGGTTTCTGATGCAATTCCCTCCCTTGGCTGGTTGGACACTGTGAGAGGATATACGGCAAAAATGAAGAGAATAGCTAGGGAGGTGGATCAGGTGCAGGGAAGCTGGGTGGAGGAGCATCGCCGGAAGAGGTTCTCTGGAAGCATGAACGAGGCTGTGCAAGACTTCATCCATGTCATGCTGTCTGTTATTGATGATGGTCAGTTCTCTGATCATGACCATGACACTGTCATTAAGGCTACTTGCTTGACTCTAATAATAGGCGGCTCTGATTCAACGGTGATCACACTGACCTGGGCCCTCTGTCCGCTAATGAACAATCCCAGCACTCTAAAAAGAGCACAAGATGAGTTAGACATCAAAGTGGGAAAGCATCGCCAAGTGGATGAGTCAGACATAAAGAACCTAGTCTACTTGCAAGCCATCATCAAGGAAACCTTACGACTGTACCCTGCTGCACCGCTTTCAGTGCCACGTGAGGCCATGGAGGATTGCACCATGGCAGACTTCCACATCCAAGCTGGGCGCGCCTTTTGGTTAACCTCTGGAAGTTGCACAGGGACCCCAGAATTTGGTCGGATCCTTTGGAGTTCCAACCTGAGAGGTTTCTAA 705 49.36 MVSEVAGKRYFGTSRRCRKALEDLLYLSGIFMVSDAIPSLGWLDTVRGYTAKMKRIAREVDQVQGSWVEEHRRKRFSGSMNEAVQDFIHVMLSVIDDGQFSDHDHDTVIKATCLTLIIGGSDSTVITLTWALCPLMNNPSTLKRAQDELDIKVGKHRQVDESDIKNLVYLQAIIKETLRLYPAAPLSVPREAMEDCTMADFHIQAGRAFWLTSGSCTGTPEFGRILWSSNLRGF* 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5021075 5026440 + Vvi3g521 Vvi3g521 784196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g521 234 PRINTS E-class P450 group I signature 108 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 PRINTS E-class P450 group I signature 128 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 PANTHER CYTOCHROME P450 82C3-RELATED 2 209 - -
Vvi3g521 234 PRINTS P450 superfamily signature 119 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 PRINTS P450 superfamily signature 172 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 PANTHER CYTOCHROME P450 82A1-LIKE 2 209 - -
Vvi3g521 234 Pfam Cytochrome P450 49 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 SUPERFAMILY Cytochrome P450 12 210 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g521 234 Gene3D Cytochrome P450 2 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g521 - - vvi:100262353 338.576