Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g522 ATGAAGAAAATAGCTAAGGAGTTGGATTATTTGCTTGGAAGGTGGGTGGAGGAGCATCGCCAGCAAAGGCTTTCCGCAAACAACAACAGGGCTGAGGTAGACTTCCTCCATGTCATGCTTTCCGTCATAGATGATGGCCAATTCTCTGGTCGTGATCCTGATACCGTCATTAAGGCCACTTGCTTGAACCTCATATTAGCTGGCTATGACACAACATCTATCACTCTTACATGGGCCCTCTCTCTTCTACTGAACAACCGCCATGCGCTAAAAAAGGCACAAGCAGAGCTGGAAATCCATGTGGGTAAGCATCGCCAAGTGGATGGATCAGATATAAAGAACCTAGTCTACCTGCAAGCCATCGTCAAGGAAACATTACGATTGTACCCTCCTGGGCCACTTTCCGTGCCGCATGAGGCCATGGAAGATTGCACTGTGGCAGGCTTTCACATCCAAGCTGGGACGCGCCTTTTGGTTAATCTCTGGAAGTTGCATCGTGACCCCAGAGTCTGGGTATGCCCAGGAATCTCATTTGCACTGGAGTTGACGCATCTGGCACTAGCCAGACTGCTTCATGGTTTTGAATTGGGAGTAGTTGCAGATTCACCGGTGGATATGACTGAAGGTCCTGGGTTGAGTGCCCCCAAAGCAACCCCGCTGGAGGTCACCATTGTTCCAAGGCTACCTTTCGAGCTCTATAGTTATGAAGCAGCATAG 717 49.51 MKKIAKELDYLLGRWVEEHRQQRLSANNNRAEVDFLHVMLSVIDDGQFSGRDPDTVIKATCLNLILAGYDTTSITLTWALSLLLNNRHALKKAQAELEIHVGKHRQVDGSDIKNLVYLQAIVKETLRLYPPGPLSVPHEAMEDCTVAGFHIQAGTRLLVNLWKLHRDPRVWVCPGISFALELTHLALARLLHGFELGVVADSPVDMTEGPGLSAPKATPLEVTIVPRLPFELYSYEAA* 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5037282 5039660 + Vvi3g522 Vvi3g522 784197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g522 238 PRINTS P450 superfamily signature 67 84 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 PRINTS P450 superfamily signature 120 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 SUPERFAMILY Cytochrome P450 2 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 Gene3D Cytochrome P450 1 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 PANTHER CYTOCHROME P450 82C3-RELATED 1 171 - -
Vvi3g522 238 PANTHER CYTOCHROME P450 82C3-RELATED 172 234 - -
Vvi3g522 238 PANTHER CYTOCHROME P450 82A1-LIKE 1 171 - -
Vvi3g522 238 PANTHER CYTOCHROME P450 82A1-LIKE 172 234 - -
Vvi3g522 238 PRINTS E-class P450 group I signature 56 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 PRINTS E-class P450 group I signature 76 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 PRINTS E-class P450 group I signature 160 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g522 238 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g522 - K23136 vvi:100265877 457.218