Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g531 ATGAATGCATGGGTGCACTTAGAAAAGGTGGTGAATAATTGCACCATCCTTCATAATTTATTAGTGTTACCCCACCCCTTCCGGATTTTCGCAATGTCATCCTCGTCTTCTTCTTCTTCCTCTTCTCGACCAGAGCTTCCGTTACGGAAAATTCCAGGAGATTATGGATTACCCTTCTTTGGTCCCATAAGGAATCGTTTCGACTACTTTTACAATCAAGGGCAGGATGAGTTCTTCAAAACCCGGATGCAGAAATATCATTCCACAGTCTTCAGAGCCAACATGCCGCCAGGCCCCTTCATCTCTTCCGACTCCAAGGTGGTTGTTCTTCTCGACACCGTCAGCTTTCCCGTTCTTTTCGACTCCTCCAAAGTCGAGAAGAGAAACGTCTTCGTCGGGACTTTCATGCCCTCCACCGACTTAACAGGCGGGTACCGCGTCCTTCCATATCTCGACCCCTCCGAACCCAAACACGATCTTCTCAAACGCTTCTCCTTCTCTCTACTCGCATCTCGCCATCGCGACTTCATTCCCGTCTTCCGACCCAATATTTTCTTAAAATGGCTGTTCCTCCAACTTTCTCCTCTCTTGACTCTTGGGTTGTCCATTTTACCAAACTTCATAGATGATTTGCTTCTACACACATTTCCCTTCCCACCATTCTTGGTAAAGTCCGATTATAATAAGCTTTATAAGGCCTTTTATGAATCGGCCTCTTCAGTATTGGATGAAGGTGAAAGAATGGGGATAAAGAGAGATGAAGCTTGCCACAACCTTGTATTCCTAGCTGGTTTCAATTCGTTCGGTGGCATGAAGGTTTTTTTTCCCGCTTTGATCAAGTGGGTTGGGTTAGCAGGAGAGAAGCTACACCGCGAACTCGCTGATGAAATAAGGACCGTTATCAAGGCTGAGGGAGGAGTGACATTTGCAGCGTTGGATAAGATGGCTTTGACTAAATCAATGGTTTATGAGGCTCTGAGGATTGAGCCTCCGGTTCCGTTCCAGTATGGGAAGGCCAGGGAGGATATGGTGATCCACAGCCATGATGCCGCGTTTGAGATCAAGAAAGGGGAGATGATCTTTGGATATCAACCCTTTGCCACCAAGGATCCTAAGGTTTTCGAGAACCCTGAGGAGTTTGTGGCCCATAGGTTCATGGGTGAGGGGGAGAAATTGCTTAAGTACGTGTACTGGTCTAATGGACGAGAGACGGATAATCCGACGGCGGAGAATAAACAGTGCTCAGGGAAGGATCTGGTGGTGCTGATCTCCAGGTTAATGCTGGTGGAGATTTTCCTTCGTTACGATACTTTCGAAGTTGAGTCTGGGACCATGCTGTTAGGATCATCTCTGCTTTTCAAGTCGTTGACCAAGACCAGTTACACTTGA 1389 46.94 MNAWVHLEKVVNNCTILHNLLVLPHPFRIFAMSSSSSSSSSSRPELPLRKIPGDYGLPFFGPIRNRFDYFYNQGQDEFFKTRMQKYHSTVFRANMPPGPFISSDSKVVVLLDTVSFPVLFDSSKVEKRNVFVGTFMPSTDLTGGYRVLPYLDPSEPKHDLLKRFSFSLLASRHRDFIPVFRPNIFLKWLFLQLSPLLTLGLSILPNFIDDLLLHTFPFPPFLVKSDYNKLYKAFYESASSVLDEGERMGIKRDEACHNLVFLAGFNSFGGMKVFFPALIKWVGLAGEKLHRELADEIRTVIKAEGGVTFAALDKMALTKSMVYEALRIEPPVPFQYGKAREDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFENPEEFVAHRFMGEGEKLLKYVYWSNGRETDNPTAENKQCSGKDLVVLISRLMLVEIFLRYDTFEVESGTMLLGSSLLFKSLTKTSYT* 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5183320 5191752 - Vvi3g531 Vvi3g531 784206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g531 462 PANTHER CYTOCHROME P450 26 33 178 - -
Vvi3g531 462 PANTHER CYTOCHROME P450 26 182 447 - -
Vvi3g531 462 Gene3D Cytochrome P450 42 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 PRINTS E-class P450 group IV signature 315 331 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 PRINTS E-class P450 group IV signature 352 366 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 PRINTS E-class P450 group IV signature 368 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 SUPERFAMILY Cytochrome P450 47 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 Pfam Cytochrome P450 291 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g531 462 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 182 447 - -
Vvi3g531 462 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 33 178 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g531 Vvi18g863 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g531 K01723 - vvi:100241751 784.637