Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g532 ATGTCATCCTTGTCTTCTTCTTCTTCCTCTTCTCGATCAGAGCTTCCGTTACTGAAAATTCCAGGCGATTATGGATTACCCTTCTTTGGTCCCATAAGGGATCGTTTCGACTACTTTTACAATCAAGGGCAGGACGAGTTCTTCAAAACCCGGATGCAGAAATATCATTCCACAGTCTTCAGAGCCAACATGCCGCCAGGCCCCTTCATCTCTTCCGACTCCAAGGTGGTTGTTCTTCTCGACGCCGTCAGCTTTCCCGTTCTTTTCGACTCTTCCAAAGTCGAGAAGAGAAACGTCCTCGACGGGACTTTCATGCCCTCCACCGACTTAACAGGCGGGTACCGTGTCCTTGCATTTCTCGACCCCTCCGAACCCAAACACGATCTTCTCAAACGCTTCTCCTTCTCTCTACTCGCATCTCGCCATCGCGACTTCATTCCCGTCTTCCGACCCAATATTTTCTCAAAATGGCTGTTCCTCCAACTTTCTCCTCTCATGACTCTTGGGTTGTCCATGTTACCAAACTTCATAGAAGATTTGCTTCTACACACATTTCCCTTACCACCATTCTTGGTAAAGTCCGATTATAATAAGCTTTATAAGGCCTTTTACGAATCGGCCTCTTCAGTATTGGATGAAGGTGAGAGAATGGGGATTAATAGAGATGAAGCTTGCCACAACCTTGTATTCCTAGCTGGTTTCAGTACGTTCGGTGGCATGAAGGTTTTGTTTCCCCCTTTGATCAAGTGGGTTGGGTTAGCAGGAGAGAAGCTACACCGCGAACTCGCTGATGAAATAAGGACCGTTGTTAAGGCTGAGGGAGGAGTGACATTTGCAGCGTTGGATAAGATGGCTTTGACTAAATCAGTGGTTTATGAGGCTCTGAGGATTGGGCCTCCGGTTCCGTTCCAGTATGGGAAGGCCAGGGAGGATATGGTGATCCACAGCCATGATGCCGCGTTTGAGATCAAGAAAGGGGAGATGATCTTTGGATATCAACCCTTTGCCACTAAGGATCCTAAGGTTTTCGAGAACCCTGAGGATTTTGTGGCCCATCGGTTTATGGGTGAGGGGGAGAAATTGCTTAAGTACGTGTACTGGTCTAATGGACGAGAGACGGATAATCCGACGGCGGAGAATAAACAGTGCTCAGGGAAGGATCTGGTGGTGCTGATCTCCAAGTTAATGCTGGTGGAGATTTTCCTTCGTTACGATACTTTCGAAGTTGAGTCTGGGACCATGGTGTTAGGATCCGCTGTGCTTTTCAAGTCGTTGACCAAGTCCAGTTACACTTGA 1296 47.69 MSSLSSSSSSSRSELPLLKIPGDYGLPFFGPIRDRFDYFYNQGQDEFFKTRMQKYHSTVFRANMPPGPFISSDSKVVVLLDAVSFPVLFDSSKVEKRNVLDGTFMPSTDLTGGYRVLAFLDPSEPKHDLLKRFSFSLLASRHRDFIPVFRPNIFSKWLFLQLSPLMTLGLSMLPNFIEDLLLHTFPLPPFLVKSDYNKLYKAFYESASSVLDEGERMGINRDEACHNLVFLAGFSTFGGMKVLFPPLIKWVGLAGEKLHRELADEIRTVVKAEGGVTFAALDKMALTKSVVYEALRIGPPVPFQYGKAREDMVIHSHDAAFEIKKGEMIFGYQPFATKDPKVFENPEDFVAHRFMGEGEKLLKYVYWSNGRETDNPTAENKQCSGKDLVVLISKLMLVEIFLRYDTFEVESGTMVLGSAVLFKSLTKSSYT* 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5192901 5194353 - Vvi3g532 Vvi3g532 784207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g532 431 PANTHER HYDROPEROXIDE LYASE 151 409 - -
Vvi3g532 431 PANTHER HYDROPEROXIDE LYASE 15 150 - -
Vvi3g532 431 Gene3D Cytochrome P450 11 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 Pfam Cytochrome P450 260 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 PANTHER CYTOCHROME P450 26 151 409 - -
Vvi3g532 431 PANTHER CYTOCHROME P450 26 15 150 - -
Vvi3g532 431 SUPERFAMILY Cytochrome P450 16 413 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 PRINTS E-class P450 group IV signature 383 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 PRINTS E-class P450 group IV signature 284 300 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 PRINTS E-class P450 group IV signature 337 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi3g532 431 PRINTS E-class P450 group IV signature 321 335 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g532 K01723 - vvi:100252012 826.624