Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g609 ATGGCAATAAATCAACATCATCAACAAACACCACCACAGCCCCCCAACTCGTCTTCTTTTTTATTGGATGCTCTCTACTGTGAGGAGGAGAGATGGGAGGAGGAAGAAGAAGATGAGTGTTTGCAGGAGGAAGCCTACCCTTCATCTACTCTTCTTCCTCTGCTGTTGCTGGAACAGGATTTGTTCTGGGAAGATGAGGAGCTTCTGTCTCTCTTCTCCAAAGAAGAGCAGCAAGCGAGTCTCGGTGCCGGCAATGGTGAAATGGATGGTGCTCTCGCTGTAGCTCGGCGTCAGGCCGTGGAGTGGATGATGAAGGTCAATGCCCATTACGGATTCTCAGCTGTAACTGCGATTCTCGCCATTAACTACTTGGATAGGTTCCTTTCAAGCCTCCATTTTCAGAGAGATAAGCCATGGATGATCCAGCTAGCAGCTGTGACTTGTCTCTCCTTGGCTGCCAAGGTGGAAGAGACCCAAGTGCCTCTCCTCCTAGACCTGCAAGTGGAGGACAGCAAGTATGTGTTTGAAGCGAAAACAATTCAGAGAATGGAGCTTCTGGTGCTCTCAACTCTTCAATGGAAGATGAACCCAGTCACCCCACTCTCCTTCATTGATCACATCATAAGAAGGCTTGGATTGAAGACCCATCTCCACTGGGAGTTTCTCCGCCTATGCGAGCGTTTTCTCCTCTCTGTCGTCGCCGATTCGAGGTTCGTCCGTTACCTTCCTTCTGTATTGGCTACTGCAACAATGCTTCACGTAATAAATCATGTTGAGCCCTGCAATCCTATTGAATACCAAAACCAGCTTCTGGGAATCCTCAAAATCGACAAGGATAAAGTGACTGAATGCCATCAACTCATTGTGGAAGTATCAAACACCCATTTCTATGCTCAAAACAACCCTCACAAGCGCAAGTACACCAAAATTCCTGGCAGCCCAAATGGTGTGATGGATGCATATTTCAGCTGTGATAGCTCAAACGATTCTTGGGCTGTGGAATCATCAGTGTCCTCTTCACCGGTCGACCCTCTCTTCAAGAAAAGCAGAACCCAGGAGCAGCAGATGCGGTTGCCATCACTGAACCGTGTCTTTGTGGATGTCATTGGCAGCAGTCCTCGTTAA 1125 48.18 MAINQHHQQTPPQPPNSSSFLLDALYCEEERWEEEEEDECLQEEAYPSSTLLPLLLLEQDLFWEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATATMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNNPHKRKYTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFVDVIGSSPR* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5973764 5975813 + Vvi3g609 Vvi3g609 784284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g609 374 SMART cyclin_7 101 189 IPR013763 -
Vvi3g609 374 CDD CYCLIN 96 188 IPR013763 -
Vvi3g609 374 SMART Cyclin_C_2 198 326 IPR004367 -
Vvi3g609 374 PANTHER CYCLINS 43 349 IPR039361 -
Vvi3g609 374 Gene3D - 197 286 - -
Vvi3g609 374 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Vvi3g609 374 MobiDBLite consensus disorder prediction 335 354 - -
Vvi3g609 374 SUPERFAMILY Cyclin-like 62 196 IPR036915 -
Vvi3g609 374 Pfam Cyclin, C-terminal domain 198 308 IPR004367 -
Vvi3g609 374 Pfam Cyclin, N-terminal domain 95 196 IPR006671 -
Vvi3g609 374 PANTHER CYCLIN D3.1 PROTEIN 43 349 - -
Vvi3g609 374 Gene3D - 94 196 - -
Vvi3g609 374 SUPERFAMILY Cyclin-like 199 307 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g609 Vvi7g1011 ECH
Vvi3g609 Vvi18g719 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g609 K14505 - vvi:100264093 666.766