Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g627 ATGCGTAGCCTTGGGACTGAGAAAACGACCATAGGATGGGCAGCTAGAGACCCTTCTGGCGCTCTCTCTCCCTACACCTACACCCTCAGAAACACAGGCCCAGAAGATGTAGTGATAAAGGTCACCTACTGTGGAATTTGCCATTCTGATCTTCATCTAATAAAAAATCACCAGGGCATATCCCACTACCCCATGGTTCCTGGGCATGAGGTGGTAGGTGAGGTGGTGGAGGTGGGATCAGATGTGAGAAAGTTCAGAGTAGGAGACTGCGTGGGAGTGGGGCTCCTCGTCGGATGCTGCGGAATCTGCCGTCCATGCAAATCAGAGATGGAGCAGTACTGCAACCAGGTGATCTGGTCCTACAACCATGTCTACACTGATGGCAAACCCACCCAAGGAGGCTTTGCTCGATCCATGATCGTTGATCAAAAGTTTGCGGTGAAAATACCAGATGGGATGGCACCGGAGCAGGCGGCGCCACTACTGTGCGCGGGGGTGACAGCGTACAGCCCACTGAGTCACTTGGGGTTGAAGAAGAGTGGGTTGAGAGGAGGAATACTGGGGCTTGGGGGAGTTGGGCACATGGGTGTGAAGATAGCAAAAGCCATGGGCCACCATGTGACTGTCATCAGCTCTTCTGATCGGAAGAGAGAGGAGGCCATGGACCATCTTGGCGCCGATGATTACTTGATCAGCTCTGACTCCACTCGGATGCAGAAAGCTGCCGATTCCCTTGACTATATCATTGATACTGTCCCTGTCTTTCACCCTCTTGAGCTATATCTTTCCTTGCTCAAGCTCGACGGCAAGTTGATTCTCTTGGGTATTATTAACACTCCTCTCCAGTTTGCCAACCCCATGGTTATGCTTGGGAGGAAAAGCATAACTGGGAGCTTCATAGGAAGCATGAAGGAGACAGAGGAAGTGCTGGAATTCTGCAAGGAGAAGGGAGTTACATCAATGATCGAAATGGTGAAAATGGATTATGTTAACACAGCTTTCGAGAGGTTGGAGAAGAACGATGTGAGATACAGGTTCGTGGTTGATGTTGCTGGAAGCAAGCTTGATCAGTGA 1074 50.56 MRSLGTEKTTIGWAARDPSGALSPYTYTLRNTGPEDVVIKVTYCGICHSDLHLIKNHQGISHYPMVPGHEVVGEVVEVGSDVRKFRVGDCVGVGLLVGCCGICRPCKSEMEQYCNQVIWSYNHVYTDGKPTQGGFARSMIVDQKFAVKIPDGMAPEQAAPLLCAGVTAYSPLSHLGLKKSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDRKREEAMDHLGADDYLISSDSTRMQKAADSLDYIIDTVPVFHPLELYLSLLKLDGKLILLGIINTPLQFANPMVMLGRKSITGSFIGSMKETEEVLEFCKEKGVTSMIEMVKMDYVNTAFERLEKNDVRYRFVVDVAGSKLDQ* 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6179764 6181426 - Vvi3g627 Vvi3g627 784302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g627 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 357 - -
Vvi3g627 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Vvi3g627 357 CDD CAD1 12 349 - -
Vvi3g627 357 Gene3D - 13 350 - -
Vvi3g627 357 PANTHER ALDEHYDE REDUCTASE 4 357 - -
Vvi3g627 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Vvi3g627 357 Pfam Zinc-binding dehydrogenase 191 313 IPR013149 -
Vvi3g627 357 Gene3D - 164 320 - -
Vvi3g627 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Vvi3g627 357 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Vvi3g627 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g627 K00083 - vvi:100262421 644.81