Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g692 ATGAGTTGCAGTGGCTGCAGAGTTCTTCGTAAAGGTTGTAGTGAGAATTGCATGCTTCGGCAGTGTTTGGAGTGGATTGACAGCCCTGAAGCTCAAGCTAATGCCACCATCTTTGTCGCCAAGTTCTTTGGTCGCGCCGATCTCATGGCCTTCATCTCCACCGTACCGGAGAGGCAACGTCCATGCTTGTTTCAGTCTCTGTTGTTTGAAGCGTGTGGTCGGACGGTGAATCCTGTGTTCGGAGCGGTAGGGTTATTGTGGACGGGGAACTGGCACGTGTGCCAGTCGGCAGTGGAGACGGTGCTCCGTGGCGGCGAGCTAGCGCCGCTACCAGAGTTTCTCGATCTCGAAGGAGTTGAGACGCCGGTTTCCGAGGCATACTTGGCGGAGGAGTACCTTTCGAAGCCAGGAGATACTGATTACAGATTGACGGATGTCAATCTCCGACCAAAGCATGGTTCAGCAACGGGAATGAAGATTGAAGAAACGGAGGAGCGGAGACCGAGGACGTCTCCGGACGATTCTGCGACGATGACAAATTGCAATAAATTGAGATCTTACTACAAAACAATCAAGAGCATGAAACTCAGAGGCAGCCCAACAACTACTAAATAA 615 51.71 MSCSGCRVLRKGCSENCMLRQCLEWIDSPEAQANATIFVAKFFGRADLMAFISTVPERQRPCLFQSLLFEACGRTVNPVFGAVGLLWTGNWHVCQSAVETVLRGGELAPLPEFLDLEGVETPVSEAYLAEEYLSKPGDTDYRLTDVNLRPKHGSATGMKIEETEERRPRTSPDDSATMTNCNKLRSYYKTIKSMKLRGSPTTTK* 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7098159 7099838 - Vvi3g692 Vvi3g692 784367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g692 204 MobiDBLite consensus disorder prediction 155 172 - -
Vvi3g692 204 MobiDBLite consensus disorder prediction 150 177 - -
Vvi3g692 204 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Vvi3g692 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 182 - -
Vvi3g692 204 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Vvi3g692 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 182 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g692 Vvi7g948 ECH
Vvi3g692 Vvi18g662 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14677 PF03195 LOB 1.40E-24 No_clan Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g692 - - vvi:100265159 367.466