Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g735 ATGCGGCGGACTGGTCTGCCCGCCCGAGACCTTCGCATCCTCGACCCTCTTCTCTCGTACCCGTCGACGGTGCTGGGTCGAGAGCGAGCAATAGTGATAAATCTGGAGCACATAAAGGCCATAATCACATGCCAAGAGGTTCTCTTGCTCAATTCCAAAGATCCCTCTGTTACTCCCTTTGTTGAAGAGCTTCAGAGACGGCTCTTGCGTCTCCACCACGCCACTAAGTCACATGAGGGTGGAATGCATGCTACTAATACAGACTGGACAAATCTATATGATCTGGGAGAGCCACAATCAAGGGTGGTTAGCCCGCAAAATTTTTCTGGAGACTTTTCACAGTTTCAGGACCAAGACGAGGGAGCTAAAGCTGATGGGAGACCAGGTCTTGAGAATCAAGATGGATTGAAAGTTCTTCCATTTGAGTTTATTGCTTTGGAGGCGTGCCTTGAGGCTGCTTGCAGTTGCTTAGAAAATGAAGCAAGGACATTAGAGCAAGAAGCTCATCCAGCTTTAGATAAGCTTACTTCAAAGATCAGTACGCTCAATTTGGAACGTGTCCGTCAAATTAAAAGTCGCTTGGTTGCAATAACTGGGCGTGTTCAAAAGGTTAGGGATGAATTAGAACATCTGCTAGATGATGATGAAGATATGGCTGAGATGTATCTGACTGACAAGATGATCCAACAACACCTTGAAAATTCTTCTGTTTCCTCTATTCATGAGAGAGATGGCATGGATGATGGAGTTCTTCATGCAGACATGGATGATGGGATTCCTGATGAAATCTCATTGGAAGCCAATGGTGTTTCTGCTACTTATGAAGGTGATCTTCAAAACATTGATAACCCTCAGGAACATTTGTTTGGCACACCTCATGCCCTTGGAAGAGACAGCCATGGGACCCATACTAGTACCACACACAGTGCTATAAGCAAGCACCTTGATGTGGAGGAGCTTGAAATGCTCTTGGAGGCATATTTTGTGCAAATTGATGGTACACTGAACAAACTATCCACGCTGAGGGAGTACGTGGATGACACGGAGGACTACATCAACATAATGCTGGATGACAAGCAGAACCATCTCTTGCAAATGGGTGTCATGTTGACAACAGCAACTCTAGTTGTTAGTGCATTTGTGGTGGTGGCTGGCATCTTTGGCATGAATATCCATATCGAGCTGTTTGATGATAAAAAATCAGGAGTGCAAGAGTTCCTGTGGACTGTTGGTGGTGGTGCCACCGGGAGCATCTTCCTCTATGTCATTGCTATTGCTTGGTGTAGGCACAAGCGCTTGCTGGAGTAA 1308 45.87 MRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITCQEVLLLNSKDPSVTPFVEELQRRLLRLHHATKSHEGGMHATNTDWTNLYDLGEPQSRVVSPQNFSGDFSQFQDQDEGAKADGRPGLENQDGLKVLPFEFIALEACLEAACSCLENEARTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKMIQQHLENSSVSSIHERDGMDDGVLHADMDDGIPDEISLEANGVSATYEGDLQNIDNPQEHLFGTPHALGRDSHGTHTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDKKSGVQEFLWTVGGGATGSIFLYVIAIAWCRHKRLLE* 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7831769 7853146 - Vvi3g735 Vvi3g735 784410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g735 435 Gene3D - 1 52 - -
Vvi3g735 435 CDD Mrs2_Mfm1p-like 1 433 IPR039204 -
Vvi3g735 435 Gene3D Magnesium transport protein CorA, transmembrane region 60 363 - -
Vvi3g735 435 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 435 IPR039204 -
Vvi3g735 435 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 1 435 - -
Vvi3g735 435 Coils Coil 147 167 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g735 - - vvi:100258345 806.208